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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
78.6
nTPM
HPA Brain:
84.7
nTPM
GTEx:
78.6
nTPM
FANTOM5:
45.6
Scaled Tags Per Million
Pig:
22.8
nTPM
Mouse:
85.7
nTPM
Allen mouse:
2.5
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
84.7
Sample id
Sample description
nTPM
Amygdala nTPM: 84.7
2695
Female, age 67, right hemisphere
106.1
2814
Male, age 76, right hemisphere
96.8
1987
Female, age 91, left hemisphere
79.0
2514
Male, age 75, right hemisphere
76.4
2517
Female, age 94, left hemisphere
65.2
Basal amygdala nTPM: 69.8
2609
Male, age 75, right hemisphere
86.9
2827
Female, age 67, right hemisphere
71.6
1955
Male, age 76, both hemispheres
71.3
2110
Male, age 80, left hemisphere
66.8
2685
Female, age 94, left hemisphere
63.7
2243
Female, age 91, right hemisphere
58.6
Central amygdala nTPM: 79.8
1905
Male, age 76, both hemispheres
99.7
2515
Male, age 75, right hemisphere
90.0
2826
Female, age 94, left hemisphere
90.0
2239
Male, age 80, left hemisphere
60.8
2701
Female, age 91, right hemisphere
58.4
Corticomedial amygdala nTPM: 64.5
2428
Male, age 75, right hemisphere
84.7
2829
Male, age 80, left hemisphere
76.9
2240
Male, age 76, both hemispheres
62.5
2429
Female, age 94, left hemisphere
61.1
2242
Female, age 91, right hemisphere
54.8
2535
Female, age 67, right hemisphere
47.2
Lateral amygdala nTPM: 76.9
1883
Male, age 76, both hemispheres
95.2
2516
Male, age 75, right hemisphere
94.6
2830
Female, age 67, right hemisphere
86.1
2534
Female, age 94, left hemisphere
72.5
2256
Male, age 80, left hemisphere
58.2
2255
Female, age 91, right hemisphere
54.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
78.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 78.6
Samples: 152
Max nTPM: 159.4
Min nTPM: 38.8
Std nTPM: 18.6
Median nTPM: 78.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
159.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
133.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
130.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
127.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
121.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
119.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
117.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
115.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
110.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
109.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
108.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
106.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
104.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
103.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
102.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
100.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
99.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
96.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
96.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
95.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
94.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
94.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
93.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
93.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
93.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
93.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
92.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
92.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
91.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
91.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
91.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
90.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
89.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
89.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
89.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
89.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
89.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
88.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
87.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
86.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
86.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
86.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
84.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
84.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
84.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
84.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
83.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
83.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
83.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
83.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
82.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
82.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
82.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
81.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
81.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
81.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
80.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
80.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
80.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
80.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
79.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
79.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
79.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
79.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
79.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
79.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
79.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
79.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
79.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
79.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
79.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
78.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
78.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
78.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
78.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
78.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
78.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
77.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
77.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
77.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
77.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
76.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
76.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
76.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
76.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
76.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
76.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
75.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
74.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
73.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
73.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
73.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
73.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
73.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
72.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
71.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
71.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
71.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
71.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
70.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
69.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
68.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
68.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
68.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
67.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
67.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
67.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
67.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
67.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
67.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
67.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
66.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
66.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
66.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
65.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
65.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
64.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
63.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
63.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
63.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
62.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
62.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
62.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
62.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
61.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
61.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
61.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
61.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
61.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
60.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
60.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
60.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
59.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
59.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
58.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
57.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
57.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
57.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
57.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
54.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
54.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
53.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
51.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
51.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
50.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
48.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
48.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
48.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
44.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
38.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 85.7
Samples: 4
Max nTPM: 96.1
Min nTPM: 79.6
Sample A
Male
82.8
Sample B
Male
84.4
Sample C
Female
96.1
Sample D
Female
79.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.