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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:45.2 nTPM
HPA Brain:74.7 nTPM
GTEx:45.2 nTPM
Pig:39.4 nTPM
Mouse:43.9 nTPM
Allen mouse:8.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 55.7
2226 Male, age 75, left hemisphere 56.2
1961 Female, age 42, unknown 55.1
Dorsomedial nucleus
nTPM: 73.7
1989 Male, age 62, unknown 106.9
2017 Female, age 42, unknown 61.8
2041 Female, age 72, unknown 52.5
Lateral hypothalamic area
nTPM: 74.7
2271 Male, age 75, both hemispheres 94.3
1791 Male, age 80, right hemisphere 88.7
2228 Male, age 66, unknown 59.2
2412 Male, age 62, unknown 56.6
Mammillary body
nTPM: 73.8
2413 Male, age 66, unknown 88.7
1923 Female, age 72, unknown 79.1
1945 Male, age 80, right hemisphere 73.9
1834 Female, age 42, unknown 64.6
1948 Female, age 72, unknown 62.8
Paraventricular nucleus
nTPM: 54.8
2700 Male, age 62, unknown 54.8
Preoptic area
nTPM: 67.4
2414 Female, age 72, unknown 71.1
1907 Male, age 80, right hemisphere 66.5
1861 Female, age 42, unknown 64.7
Supraoptic nucleus
nTPM: 73.7
1894 Female, age 72, unknown 82.3
2043 Male, age 62, unknown 80.6
2835 Female, age 72, unknown 58.3
Ventromedial nucleus
nTPM: 57.6
1982 Female, age 72, unknown 68.0
1822 Female, age 42, unknown 47.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

45.2
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 45.2
Samples: 257

Max nTPM: 89.4
Min nTPM: 20.7
Std nTPM: 12.5
Median nTPM: 44.1
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 89.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 84.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 83.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 83.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 80.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 79.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 78.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 75.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 74.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 74.0
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 73.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 70.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 70.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 69.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 68.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 68.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 67.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 67.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 67.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 67.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 66.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 65.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 65.5
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 63.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 62.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 62.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 62.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 62.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 62.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 62.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 60.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 59.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 59.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 58.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 58.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 58.3
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 58.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 58.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 58.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 57.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 56.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 56.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 56.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 56.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 55.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 54.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 54.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 54.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 54.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 54.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 54.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 54.0
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 53.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 53.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 52.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 52.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 51.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 51.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 51.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 51.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 51.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 50.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 50.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 50.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 50.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 49.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 49.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 49.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 49.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 49.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 49.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 49.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 49.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 49.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 49.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 48.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 48.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 48.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 48.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 48.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 48.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 48.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 48.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 48.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 48.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 48.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 48.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 47.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 47.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 47.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 47.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 47.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 47.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 47.5
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 47.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 47.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 47.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 46.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 46.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 46.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 46.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 46.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 46.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 46.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 46.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 46.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 46.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 45.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 45.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 45.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 45.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 45.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 45.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 45.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 45.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 45.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 45.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 45.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 45.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 44.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 44.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 44.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 44.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 44.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 44.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 44.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 44.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 44.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 44.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 44.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 44.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 44.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 44.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 43.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 43.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 43.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 43.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 43.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 43.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 43.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 43.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 42.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 42.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 42.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 42.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 42.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 41.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 41.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 41.7
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 41.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 41.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 40.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 40.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 40.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 40.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 40.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 40.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 39.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 39.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 39.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 39.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 39.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 39.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 39.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 38.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 38.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 38.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 38.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 38.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 38.0
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 37.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 37.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 37.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 37.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 37.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 37.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 37.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 37.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 37.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 37.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 37.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 37.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 37.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 37.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 37.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 36.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 36.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 36.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 36.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 36.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 36.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 36.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 36.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 36.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 36.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 35.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 35.9
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 35.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 35.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 35.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 35.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 35.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 35.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 35.0
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 35.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 34.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 34.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 34.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 34.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 33.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 33.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 33.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 33.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 33.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 33.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 33.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 33.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 33.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 33.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 33.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 33.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 32.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 32.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 32.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 32.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 32.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 32.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 31.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 31.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 31.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 31.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 31.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 31.1
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 30.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 30.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 30.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 30.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 29.0
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 28.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 28.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 28.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 28.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 28.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 27.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 27.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 27.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 27.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 26.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 25.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 24.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 23.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 22.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 21.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 20.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

39.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 39.4
Samples: 4

Max nTPM: 47.6
Min nTPM: 34.6
Sample A Female 47.6
Sample B Female 36.1
Sample C Male 39.1
Sample D Male 34.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 43.9
Samples: 4

Max nTPM: 47.8
Min nTPM: 38.9
Sample A Male 46.3
Sample B Male 47.8
Sample C Female 38.9
Sample D Female 42.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 8.2
68341860 Antisense, RP_041207_02_C12, Mouse strain C57BL/6J (56 days, male) 12.4
795 Antisense, RP_Baylor_102958, Mouse strain C57BL/6J (56 days, male) 3.9

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