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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2361.0 nTPM
HPA:2361.0 nTPM
GTEx:2100.8 nTPM
FANTOM5:3209.9 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA003364
Glandular cells Low



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2361.0
overview
Female, age 68
Salivary gland sample 216
nTPM: 2598.9
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 2030
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 2454.1
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2100.8
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 2100.8
Samples: 181

Max nTPM: 4142.3
Min nTPM: 1289.1
Std nTPM: 423.3
Median nTPM: 2037.2
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 4142.3
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 3314.5
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 3260.6
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 3093.5
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 3053.3
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 3031.6
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 3022.4
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 2985.2
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 2890.5
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 2857.1
GTEX-146FR-1226-SM-5MR78 60-69 years, female 2812.8
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 2783.0
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 2770.9
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 2736.5
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 2729.5
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 2713.2
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 2687.3
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 2684.1
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 2675.4
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 2667.9
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 2655.1
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 2576.0
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 2558.5
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 2542.1
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 2529.9
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 2522.3
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 2515.3
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 2502.8
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 2498.5
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 2465.9
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 2453.2
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 2434.3
GTEX-15SHV-2226-SM-6M464 60-69 years, male 2431.0
GTEX-Y111-2626-SM-4TT24 50-59 years, male 2428.7
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 2423.4
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 2398.9
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 2393.9
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 2390.8
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 2390.6
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 2386.9
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 2383.7
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 2381.1
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 2375.0
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 2358.3
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 2338.8
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 2333.9
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 2293.0
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 2285.0
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 2282.1
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 2278.4
GTEX-1445S-2926-SM-5O993 60-69 years, male 2256.9
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 2253.2
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 2241.0
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 2234.4
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 2231.1
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 2229.4
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 2225.0
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 2221.3
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 2216.2
GTEX-X261-2426-SM-4PQZU 50-59 years, male 2183.4
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 2180.3
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 2168.5
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 2152.1
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 2145.4
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 2138.9
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 2138.0
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 2136.1
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2135.5
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 2118.2
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 2113.2
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 2109.3
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 2104.9
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 2104.4
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 2098.4
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 2093.6
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 2079.3
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 2078.2
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 2076.0
GTEX-13113-1526-SM-5EGHV 60-69 years, female 2070.6
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 2069.9
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 2069.1
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 2067.5
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 2067.2
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 2056.9
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 2055.5
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 2054.2
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 2053.9
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 2044.5
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 2041.6
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 2040.7
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 2037.2
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 2031.2
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 2030.8
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 2029.1
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 2028.4
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 2026.6
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 2015.9
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 2012.0
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 2010.5
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 2009.6
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 2009.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 2009.0
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 2005.2
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 2004.2
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 2000.9
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1997.8
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1996.5
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1992.5
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1980.7
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1979.0
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1978.8
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1976.1
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1974.7
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1972.0
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1950.8
GTEX-11P82-0926-SM-5986X 20-29 years, male 1948.4
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1946.4
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1943.6
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1939.2
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1938.1
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1927.7
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1926.2
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1925.3
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1916.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1912.9
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1903.5
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1899.9
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1896.2
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1895.4
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1892.8
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1881.1
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 1877.4
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1855.7
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1853.0
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1833.7
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1832.2
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1824.6
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1814.6
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1808.4
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1808.1
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1801.3
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1800.9
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1797.6
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1797.0
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1787.7
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1773.3
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1761.9
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1760.5
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1758.3
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1757.4
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1755.9
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 1749.5
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1740.7
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1730.2
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1727.1
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 1719.2
GTEX-1B932-0626-SM-731EM 40-49 years, female 1706.3
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1699.7
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1696.8
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1680.1
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1677.7
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1671.0
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1598.5
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1595.8
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1583.0
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1575.9
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1561.3
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1546.9
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1533.3
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1527.8
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1500.6
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1469.5
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1449.2
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1420.8
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1416.1
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1401.0
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1351.2
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1340.8
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1304.7
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1299.7
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 1289.1
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

3209.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1792.7
FF:10199-103F1 23 years, male 1792.7
Salivary gland
Scaled Tags Per Million: 2161.8
FF:10093-102C3 16-60 years, mixed 2161.8
Submaxillary gland
Scaled Tags Per Million: 3209.9
FF:10202-103F4 24 years, male 3209.9

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