HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:41.8 nTPM
HPA Brain:45.0 nTPM
GTEx:41.8 nTPM
FANTOM5:48.2 Scaled Tags Per Million
Pig:11.1 nTPM
Mouse:32.4 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009975
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 45.0
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
1898 Male, age 80, left hemisphere 47.4
2148 Female, age 91, left hemisphere 44.1
1855 Male, age 76, left hemisphere 42.7
2621 Female, age 67, right hemisphere 42.3
2529 Female, age 94, left hemisphere 38.4
1911 Female, age 85, right hemisphere 38.1
Dentate gyrus
nTPM: 40.0
2010 Male, age 76, both hemispheres 46.3
2530 Female, age 94, left hemisphere 44.1
2528 Male, age 74, both hemispheres 38.9
2246 Female, age 85, both hemispheres 38.8
1927 Female, age 91, both hemispheres 37.4
2531 Female, age 67, both hemispheres 34.3
Entorhinal gyrus
nTPM: 43.6
2117 Female, age 91, right hemisphere 51.4
2764 Male, age 80, right hemisphere 45.0
2686 Male, age 75, right hemisphere 44.5
1938 Female, age 85, left hemisphere 43.9
2613 Female, age 94, left hemisphere 40.5
1787 Male, age 76, left hemisphere 36.5
Hippocampus, CA1
nTPM: 45.0
2749 Male, age 80, left hemisphere 60.4
1873 Female, age 85, both hemispheres 45.5
2045 Male, age 76, both hemispheres 40.6
2082 Female, age 91, right hemisphere 39.7
2527 Male, age 74, both hemispheres 38.9
Hippocampus, CA2
nTPM: 40.9
1963 Male, age 80, left hemisphere 47.5
1892 Male, age 76, both hemispheres 45.2
1940 Female, age 85, left hemisphere 40.2
2249 Male, age 74, both hemispheres 39.3
2437 Female, age 94, left hemisphere 36.9
2113 Female, age 91, right hemisphere 36.5
Hippocampus, CA3
nTPM: 41.1
1867 Male, age 76, both hemispheres 46.4
2861 Female, age 67, both hemispheres 42.2
2137 Male, age 80, left hemisphere 41.4
1891 Female, age 85, both hemispheres 41.2
2620 Female, age 94, left hemisphere 39.0
2436 Male, age 74, both hemispheres 36.6
Parahippocampal cortex
nTPM: 39.9
2245 Female, age 91, both hemispheres 44.5
1933 Female, age 85, both hemispheres 44.0
2018 Male, age 76, both hemispheres 42.3
1850 Male, age 80, both hemispheres 41.0
1990 Female, age 91, right hemisphere 39.6
2622 Female, age 67, right hemisphere 39.3
2532 Female, age 72, left hemisphere 39.1
2692 Male, age 74, both hemispheres 39.1
2250 Female, age 67, right hemisphere 36.6
2693 Female, age 94, both hemispheres 33.5
Perirhinal gyrus
nTPM: 39.3
1794 Male, age 80, right hemisphere 43.4
1847 Female, age 91, left hemisphere 42.0
1841 Female, age 85, right hemisphere 40.1
2521 Female, age 94, right hemisphere 37.2
2848 Male, age 76, right hemisphere 34.0
Subiculum
nTPM: 41.2
2042 Male, age 76, both hemispheres 48.8
1901 Male, age 80, both hemispheres 47.3
1977 Female, age 85, both hemispheres 43.4
2729 Female, age 91, right hemisphere 39.2
2619 Male, age 74, both hemispheres 36.8
2438 Female, age 94, left hemisphere 31.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 41.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.8
Samples: 197

Max nTPM: 61.4
Min nTPM: 18.5
Std nTPM: 7.1
Median nTPM: 41.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 61.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 58.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 58.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 56.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 56.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 55.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 54.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 53.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 53.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 53.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 48.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.2
FF:10153-102I9 76 years, female 50.7
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.1
Pig sample Sample description nTPM
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.7
Sample A Female 10.6
Sample B Female 11.2
Sample C Male 9.7
Sample D Male 10.3
Dorsal hippocampus
nTPM: 8.9
Samples: 4

Max nTPM: 9.2
Min nTPM: 8.6
Sample A Female 8.6
Sample B Female 9.2
Sample C Male 8.8
Sample D Male 8.8
Entorhinal cortex
nTPM: 11.1
Samples: 4

Max nTPM: 11.6
Min nTPM: 10.7
Sample A Female 11.2
Sample B Female 11.6
Sample C Male 10.8
Sample D Male 10.7
Ventral hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 10.2
Min nTPM: 8.0
Sample A Female 8.0
Sample B Female 9.5
Sample C Male 9.5
Sample D Male 10.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 32.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.8
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.7
Sample A Male 30.6
Sample B Male 31.4
Sample C Female 36.4
Sample D Female 28.7
Hippocampal formation
nTPM: 32.4
Samples: 4

Max nTPM: 35.9
Min nTPM: 30.1
Sample A Male 30.1
Sample B Male 31.7
Sample C Female 31.8
Sample D Female 35.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
71492808 Antisense, RP_050913_01_E12, Mouse strain C57BL/6J (56 days, male) 0.1

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