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TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
Tissue methods
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Follicle cells: Medium
Ovarian stroma cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:4415.7 nTPM
HPA:3669.5 nTPM
GTEx:4415.7 nTPM
FANTOM5:731.1 Scaled Tags Per Million
OVARY - SINGLE CELL RNA EXPRESSION
Explore single cell type data

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA031153Antibody CAB004027
Follicle cells Medium-
Ovarian stroma cells LowMedium




OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

3669.5
overview
Female, age 64
Ovary sample 192
nTPM: 2875.2
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 4681.6
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 3508.6
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 2507.7
N/A
Female, age 16
Ovary sample 3663
nTPM: 7270.5
N/A
Female, age 20
Ovary sample 3664
nTPM: 3064.6
N/A
Female, age 32
Ovary sample 3665
nTPM: 1778.6

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4415.7
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 4415.7
Samples: 193

Max nTPM: 10640.6
Min nTPM: 1647.0
Std nTPM: 1579.9
Median nTPM: 4122.7
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 10640.6
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 9182.2
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 8908.4
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 8681.2
GTEX-13NZ8-2526-SM-H65ZM 60-69 years, female 8626.6
GTEX-ZE7O-2226-SM-GNTC2 50-59 years, female 8352.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 8334.3
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 7765.0
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 7682.5
GTEX-183WM-1926-SM-72D5F 70-79 years, female 7572.3
GTEX-13X6H-1026-SM-5MR8F 50-59 years, female 7238.9
GTEX-16NPV-2326-SM-HL9UF 50-59 years, female 7221.2
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 7186.5
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 7158.7
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 7097.0
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 7061.8
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 7015.3
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 6965.0
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 6905.4
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 6858.2
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 6575.7
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 6471.3
GTEX-17F9Y-2226-SM-HL9UK 70-79 years, female 6435.7
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 6431.6
GTEX-QVJO-3126-SM-COH22 60-69 years, female 6211.5
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 6144.3
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 6137.7
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 6081.0
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 5874.5
GTEX-R45C-2526-SM-GRR28 60-69 years, female 5831.2
GTEX-1I1CD-2026-SM-GA91R 60-69 years, female 5713.5
GTEX-15SHU-2726-SM-HAV2W 40-49 years, female 5711.8
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 5700.6
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 5695.6
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 5681.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 5662.4
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 5640.8
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 5576.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 5524.3
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 5517.2
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 5500.3
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 5378.3
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 5373.9
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 5278.4
GTEX-13SLX-2426-SM-664OM 50-59 years, female 5272.4
GTEX-WI4N-2526-SM-4M9QQ 40-49 years, female 5176.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 5163.0
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 5108.0
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 5089.7
GTEX-15EOM-1526-SM-68723 20-29 years, female 5049.4
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 5043.9
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 5005.4
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 4974.6
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 4951.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 4934.0
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 4915.8
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 4886.8
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 4874.2
GTEX-14BIN-1426-SM-664NI 50-59 years, female 4867.8
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 4817.9
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 4790.5
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 4778.1
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 4766.7
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 4742.8
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 4740.3
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 4688.6
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 4682.6
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 4632.3
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 4625.6
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 4584.9
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 4568.6
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 4553.0
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 4546.1
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 4499.6
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 4491.2
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 4455.4
GTEX-11I78-1926-SM-59878 50-59 years, female 4424.7
GTEX-1RNTQ-1726-SM-F2I39 20-29 years, female 4408.4
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 4391.2
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 4387.3
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 4379.2
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 4348.2
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 4343.8
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 4326.8
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 4294.3
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 4291.0
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 4265.7
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 4257.1
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 4250.6
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 4234.5
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 4222.4
GTEX-S32W-1226-SM-4AD67 50-59 years, female 4204.1
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 4182.3
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 4152.7
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 4149.1
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 4122.9
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 4122.7
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 4121.4
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 4116.2
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 4088.7
GTEX-1IE54-2126-SM-GA8ZX 40-49 years, female 4078.6
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 4075.5
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 4072.7
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 4058.0
GTEX-131XW-2726-SM-HL9U9 50-59 years, female 4056.7
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 4048.1
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 4014.6
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 4001.2
GTEX-QCQG-1426-SM-48U22 50-59 years, female 3976.7
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 3971.2
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 3956.2
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 3931.1
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 3917.0
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 3895.1
GTEX-P78B-1926-SM-3P616 40-49 years, female 3894.3
GTEX-1NUQO-1726-SM-HK7A8 20-29 years, female 3870.1
GTEX-145ME-1226-SM-5MR87 40-49 years, female 3843.2
GTEX-14PKV-1226-SM-6871T 20-29 years, female 3830.8
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 3823.4
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 3811.0
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 3806.1
GTEX-W5X1-2026-SM-GPRX9 40-49 years, female 3803.5
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 3778.5
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 3746.9
GTEX-S341-0726-SM-4AD5R 40-49 years, female 3741.6
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 3730.0
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 3707.9
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 3702.9
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 3668.3
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 3663.9
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 3658.5
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 3658.0
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 3641.0
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 3634.1
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 3619.6
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 3607.2
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 3574.3
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 3564.7
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 3564.0
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 3549.0
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 3529.2
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 3432.6
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 3407.8
GTEX-18D9A-0826-SM-718C1 30-39 years, female 3369.9
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 3350.4
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 3326.3
GTEX-ZTPG-1926-SM-HAUZ1 20-29 years, female 3287.8
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 3267.8
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 3265.8
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 3238.3
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 3236.4
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 3209.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 3206.9
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 3204.6
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 3195.8
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 3123.9
GTEX-1399S-2126-SM-G8OM9 30-39 years, female 3017.7
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 2991.0
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 2980.1
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 2967.0
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 2953.3
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 2943.0
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 2937.2
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 2927.1
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 2920.0
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 2887.8
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 2801.5
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 2785.4
GTEX-Q734-0726-SM-48TZP 40-49 years, female 2757.8
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 2754.9
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 2742.8
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 2694.4
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 2685.9
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 2672.4
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 2667.0
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2591.4
GTEX-OHPN-1626-SM-GNTBJ 60-69 years, female 2512.7
GTEX-1R9JW-1226-SM-F2I1P 30-39 years, female 2501.4
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 2494.7
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 2423.0
GTEX-14JG6-0626-SM-68716 30-39 years, female 2415.6
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 2379.0
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 2333.7
GTEX-1MCYP-1426-SM-F2I3H 20-29 years, female 2330.5
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 2251.8
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 2247.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 2235.6
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 2221.1
GTEX-R55G-1526-SM-48FER 40-49 years, female 2064.3
GTEX-SE5C-0826-SM-HL9T7 40-49 years, female 1844.5
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1818.8
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1675.6
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1647.0
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

731.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 731.1
FF:10020-101D2 47,75,84 years, female 731.1

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