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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
175.9
nTPM
HPA Brain:
480.4
nTPM
GTEx:
175.9
nTPM
FANTOM5:
450.5
Scaled Tags Per Million
Pig:
344.4
nTPM
Mouse:
160.0
nTPM
Allen mouse:
22.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
480.4
Sample id
Sample description
nTPM
Amygdala nTPM: 414.5
2814
Male, age 76, right hemisphere
639.1
2517
Female, age 94, left hemisphere
430.1
1987
Female, age 91, left hemisphere
378.9
2514
Male, age 75, right hemisphere
318.8
2695
Female, age 67, right hemisphere
305.5
Basal amygdala nTPM: 480.4
2685
Female, age 94, left hemisphere
561.1
1955
Male, age 76, both hemispheres
527.2
2110
Male, age 80, left hemisphere
503.8
2243
Female, age 91, right hemisphere
480.8
2827
Female, age 67, right hemisphere
407.4
2609
Male, age 75, right hemisphere
402.1
Central amygdala nTPM: 474.2
1905
Male, age 76, both hemispheres
597.0
2239
Male, age 80, left hemisphere
501.3
2826
Female, age 94, left hemisphere
487.2
2701
Female, age 91, right hemisphere
424.1
2515
Male, age 75, right hemisphere
361.6
Corticomedial amygdala nTPM: 459.8
2829
Male, age 80, left hemisphere
563.0
2240
Male, age 76, both hemispheres
557.7
2429
Female, age 94, left hemisphere
467.0
2242
Female, age 91, right hemisphere
428.5
2535
Female, age 67, right hemisphere
419.0
2428
Male, age 75, right hemisphere
323.5
Lateral amygdala nTPM: 437.5
1883
Male, age 76, both hemispheres
556.1
2534
Female, age 94, left hemisphere
555.7
2256
Male, age 80, left hemisphere
443.7
2255
Female, age 91, right hemisphere
389.0
2516
Male, age 75, right hemisphere
345.6
2830
Female, age 67, right hemisphere
334.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
175.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 175.9
Samples: 152
Max nTPM: 412.3
Min nTPM: 4.0
Std nTPM: 59.7
Median nTPM: 172.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
412.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
355.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
331.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
324.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
301.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
297.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
292.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
283.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
278.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
278.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
269.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
267.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
265.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
260.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
257.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
253.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
252.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
247.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
243.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
238.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
235.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
233.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
233.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
229.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
228.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
226.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
225.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
222.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
217.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
216.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
214.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
213.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
212.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
212.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
210.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
210.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
209.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
207.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
206.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
205.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
204.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
201.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
201.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
200.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
198.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
197.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
196.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
195.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
195.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
193.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
192.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
191.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
190.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
189.3
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
188.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
186.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
185.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
184.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
184.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
184.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
182.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
181.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
179.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
179.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
178.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
178.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
177.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
176.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
176.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
175.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
175.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
175.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
174.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
174.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
173.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
173.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
172.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
172.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
170.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
170.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
169.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
169.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
166.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
164.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
161.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
160.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
159.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
159.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
158.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
158.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
157.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
157.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
157.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
154.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
153.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
153.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
152.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
150.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
149.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
149.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
147.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
147.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
147.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
146.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
146.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
146.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
145.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
144.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
143.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
142.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
142.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
139.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
137.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
137.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
137.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
136.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
134.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
133.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
132.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
130.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
130.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
129.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
123.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
122.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
120.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
120.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
120.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
119.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
118.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
117.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
116.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
115.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
112.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
112.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
112.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
111.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
111.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
108.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
108.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
107.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
106.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
101.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
100.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
100.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
98.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
94.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
89.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
80.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
70.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
61.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
50.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
160.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 159.9
Samples: 4
Max nTPM: 173.0
Min nTPM: 147.2
Sample A
Male
173.0
Sample B
Male
147.2
Sample C
Female
168.6
Sample D
Female
150.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.