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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
25.9
nTPM
HPA Brain:
20.2
nTPM
GTEx:
25.9
nTPM
FANTOM5:
140.8
Scaled Tags Per Million
Mouse:
10.6
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
20.2
Sample id
Sample description
nTPM
Amygdala nTPM: 20.2
2814
Male, age 76, right hemisphere
33.6
2695
Female, age 67, right hemisphere
22.5
1987
Female, age 91, left hemisphere
18.3
2517
Female, age 94, left hemisphere
16.6
2514
Male, age 75, right hemisphere
9.8
Basal amygdala nTPM: 17.7
1955
Male, age 76, both hemispheres
20.1
2110
Male, age 80, left hemisphere
19.1
2609
Male, age 75, right hemisphere
17.8
2827
Female, age 67, right hemisphere
16.9
2243
Female, age 91, right hemisphere
16.6
2685
Female, age 94, left hemisphere
15.5
Central amygdala nTPM: 19.7
1905
Male, age 76, both hemispheres
26.2
2515
Male, age 75, right hemisphere
24.9
2701
Female, age 91, right hemisphere
18.6
2239
Male, age 80, left hemisphere
16.0
2826
Female, age 94, left hemisphere
12.7
Corticomedial amygdala nTPM: 16.0
2829
Male, age 80, left hemisphere
20.8
2535
Female, age 67, right hemisphere
16.8
2240
Male, age 76, both hemispheres
15.5
2429
Female, age 94, left hemisphere
15.1
2242
Female, age 91, right hemisphere
14.0
2428
Male, age 75, right hemisphere
14.0
Lateral amygdala nTPM: 16.6
1883
Male, age 76, both hemispheres
22.2
2830
Female, age 67, right hemisphere
17.3
2255
Female, age 91, right hemisphere
16.7
2256
Male, age 80, left hemisphere
14.9
2534
Female, age 94, left hemisphere
14.8
2516
Male, age 75, right hemisphere
13.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 25.9
Samples: 152
Max nTPM: 462.3
Min nTPM: 3.1
Std nTPM: 52.1
Median nTPM: 11.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
462.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
329.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
247.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
180.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
98.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
90.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
83.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
79.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
75.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
69.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
68.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
66.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
59.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
54.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
52.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
46.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
46.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
45.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
40.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
38.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
36.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
35.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
32.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
31.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
31.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
31.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
31.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
29.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
29.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
28.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
25.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
25.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
24.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
23.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
23.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
22.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
22.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
21.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
19.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
19.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
19.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
18.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
18.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
17.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
17.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
17.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
17.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
17.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
17.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
16.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
16.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
16.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
15.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
15.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
15.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
14.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
14.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
14.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
13.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
13.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
13.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
13.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
13.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
13.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
13.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
13.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
13.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
12.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
12.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
12.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
12.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
11.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
11.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
11.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
11.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
11.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
11.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
11.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
11.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
10.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
10.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
10.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
10.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
10.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
10.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
10.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
10.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
10.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
10.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
9.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
9.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
9.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
9.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
9.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
9.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
9.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
8.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
8.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
8.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
8.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
8.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
8.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
8.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
8.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
8.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
8.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
8.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
8.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
8.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
8.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
8.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
7.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
7.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
7.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
7.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
7.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
7.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
7.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
7.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
7.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
7.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
7.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
7.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
7.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
7.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
7.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
7.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
7.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
6.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
6.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
6.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
6.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
6.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
6.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
6.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
6.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
6.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
6.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
6.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
6.2
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
6.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
6.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
6.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
6.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
5.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
5.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
5.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
4.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
4.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
3.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.