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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
18.4
nTPM
HPA Brain:
101.9
nTPM
GTEx:
18.4
nTPM
FANTOM5:
130.3
Scaled Tags Per Million
Pig:
81.4
nTPM
Mouse:
49.8
nTPM
Allen mouse:
6.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
101.9
Sample id
Sample description
nTPM
Amygdala nTPM: 95.1
1987
Female, age 91, left hemisphere
114.8
2517
Female, age 94, left hemisphere
103.9
2514
Male, age 75, right hemisphere
94.5
2814
Male, age 76, right hemisphere
86.0
2695
Female, age 67, right hemisphere
76.0
Basal amygdala nTPM: 93.1
1955
Male, age 76, both hemispheres
106.9
2243
Female, age 91, right hemisphere
104.4
2685
Female, age 94, left hemisphere
100.6
2609
Male, age 75, right hemisphere
93.5
2110
Male, age 80, left hemisphere
84.4
2827
Female, age 67, right hemisphere
68.8
Central amygdala nTPM: 95.1
2515
Male, age 75, right hemisphere
106.5
2239
Male, age 80, left hemisphere
105.8
2826
Female, age 94, left hemisphere
92.1
2701
Female, age 91, right hemisphere
89.3
1905
Male, age 76, both hemispheres
82.0
Corticomedial amygdala nTPM: 101.9
2242
Female, age 91, right hemisphere
118.1
2240
Male, age 76, both hemispheres
106.3
2429
Female, age 94, left hemisphere
105.1
2428
Male, age 75, right hemisphere
102.1
2829
Male, age 80, left hemisphere
99.7
2535
Female, age 67, right hemisphere
80.0
Lateral amygdala nTPM: 80.9
2534
Female, age 94, left hemisphere
94.1
2516
Male, age 75, right hemisphere
93.0
2256
Male, age 80, left hemisphere
88.2
2255
Female, age 91, right hemisphere
88.0
1883
Male, age 76, both hemispheres
73.5
2830
Female, age 67, right hemisphere
48.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
18.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 18.4
Samples: 152
Max nTPM: 33.3
Min nTPM: 3.5
Std nTPM: 5.6
Median nTPM: 17.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
33.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
32.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
31.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
31.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
31.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
30.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
28.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
27.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
27.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
27.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
27.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
27.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
26.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
26.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
25.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
25.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
25.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
25.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
25.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
24.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
24.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
24.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
24.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
24.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
24.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
23.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
23.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
23.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
23.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
23.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
23.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
23.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
23.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
22.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
22.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
22.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
22.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
22.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
22.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
22.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
22.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
21.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
21.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
21.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
21.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
21.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
20.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
20.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
20.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
20.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
19.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
19.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
19.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
19.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
19.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
19.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
19.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
19.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
19.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
19.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
19.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
19.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
18.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
18.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
18.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
18.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
18.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
18.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
18.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
18.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
18.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
18.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
18.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
17.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
17.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
17.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
17.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
17.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
17.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
17.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
17.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
17.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
16.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
16.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
16.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
16.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
16.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
16.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
16.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
16.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
16.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
16.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
16.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
16.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
16.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
16.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
16.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
16.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
16.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
15.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
15.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
15.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
15.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
15.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
15.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
15.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
15.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
15.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
15.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
15.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
14.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
14.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
14.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
14.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
14.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
14.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
14.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
14.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
14.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
14.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
13.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
13.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
13.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
13.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
13.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
13.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
13.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
13.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
13.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
13.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
13.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
12.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
12.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
12.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
12.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
12.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
12.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
12.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
12.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
11.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
10.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
10.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
10.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
10.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
10.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
8.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
7.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
7.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
5.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
4.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 49.8
Samples: 4
Max nTPM: 61.7
Min nTPM: 38.0
Sample A
Male
61.7
Sample B
Male
49.8
Sample C
Female
38.0
Sample D
Female
49.5
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.