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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
88.7
nTPM
HPA Brain:
34.5
nTPM
GTEx:
88.7
nTPM
FANTOM5:
79.2
Scaled Tags Per Million
Pig:
11.6
nTPM
Mouse:
73.3
nTPM
Allen mouse:
0.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.5
Sample id
Sample description
nTPM
Amygdala nTPM: 34.5
2814
Male, age 76, right hemisphere
42.6
2695
Female, age 67, right hemisphere
37.8
2514
Male, age 75, right hemisphere
37.7
1987
Female, age 91, left hemisphere
32.2
2517
Female, age 94, left hemisphere
22.1
Basal amygdala nTPM: 23.6
2609
Male, age 75, right hemisphere
36.7
1955
Male, age 76, both hemispheres
27.9
2243
Female, age 91, right hemisphere
25.6
2110
Male, age 80, left hemisphere
25.1
2685
Female, age 94, left hemisphere
17.3
2827
Female, age 67, right hemisphere
8.8
Central amygdala nTPM: 31.2
1905
Male, age 76, both hemispheres
42.1
2515
Male, age 75, right hemisphere
35.8
2701
Female, age 91, right hemisphere
32.7
2239
Male, age 80, left hemisphere
26.7
2826
Female, age 94, left hemisphere
18.5
Corticomedial amygdala nTPM: 28.1
2428
Male, age 75, right hemisphere
40.5
2242
Female, age 91, right hemisphere
32.6
2829
Male, age 80, left hemisphere
30.5
2240
Male, age 76, both hemispheres
27.1
2429
Female, age 94, left hemisphere
26.2
2535
Female, age 67, right hemisphere
11.5
Lateral amygdala nTPM: 23.2
2516
Male, age 75, right hemisphere
35.3
1883
Male, age 76, both hemispheres
33.9
2255
Female, age 91, right hemisphere
22.6
2256
Male, age 80, left hemisphere
21.4
2534
Female, age 94, left hemisphere
17.2
2830
Female, age 67, right hemisphere
8.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
88.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 88.7
Samples: 152
Max nTPM: 287.5
Min nTPM: 9.2
Std nTPM: 43.5
Median nTPM: 78.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
287.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
249.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
248.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
202.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
199.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
193.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
180.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
174.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
173.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
161.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
158.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
153.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
153.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
148.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
141.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
133.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
132.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
132.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
128.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
128.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
125.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
123.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
120.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
119.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
117.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
117.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
116.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
116.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
116.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
115.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
114.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
114.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
111.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
110.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
110.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
109.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
108.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
107.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
106.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
104.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
103.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
103.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
102.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
102.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
102.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
101.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
101.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
99.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
98.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
97.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
95.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
94.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
94.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
94.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
93.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
92.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
92.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
91.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
91.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
90.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
90.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
90.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
89.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
88.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
87.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
87.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
87.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
85.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
84.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
84.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
84.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
83.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
82.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
82.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
82.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
78.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
78.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
77.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
76.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
76.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
76.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
76.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
75.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
75.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
75.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
74.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
74.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
73.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
73.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
73.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
73.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
72.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
72.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
72.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
71.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
70.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
70.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
69.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
68.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
68.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
67.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
66.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
66.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
65.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
65.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
64.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
64.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
64.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
62.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
62.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
61.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
61.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
60.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
60.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
60.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
59.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
59.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
59.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
58.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
57.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
56.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
55.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
55.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
55.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
52.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
52.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
52.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
51.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
51.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
51.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
50.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
50.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
49.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
46.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
45.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
45.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
42.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
41.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
41.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
38.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
36.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
34.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
33.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
33.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
30.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
30.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
24.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
22.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
9.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
73.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 73.3
Samples: 4
Max nTPM: 83.8
Min nTPM: 67.4
Sample A
Male
67.4
Sample B
Male
67.4
Sample C
Female
83.8
Sample D
Female
74.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.