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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
382.3
nTPM
GTEx:
382.3
nTPM
FANTOM5:
56.2
Scaled Tags Per Million
Pig:
136.1
nTPM
Mouse:
579.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
382.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 382.3
Samples: 105
Max nTPM: 522.0
Min nTPM: 221.4
Std nTPM: 68.4
Median nTPM:
452_1
88 years, female
522.0
237_1
82 years, male
515.7
218_1
71 years, female
500.7
384_1
83 years, male
499.3
389_1
86 years, female
495.2
386_1
76 years, male
486.8
320_1
89 years, female
483.6
322_1
76 years, male
479.8
246_1
77 years, male
479.5
321_1
62 years, female
476.6
319_1
81 years, male
474.0
379_1
60 years, male
473.6
377_1
82 years, female
473.3
189_1
76 years, male
467.3
447_1
81 years, male
462.8
526_1
61 years, male
456.8
355_1
70 years, female
453.0
394_1
75 years, female
451.3
137_1
83 years, male
450.2
35_1
74 years, female
446.0
405_1
91 years, male
436.3
375_1
74 years, female
435.2
243_1
75 years, male
431.8
354_1
81 years, female
429.8
376_1
75 years, female
426.2
153_1
70 years, female
425.8
406_1
79 years, male
424.7
251_1
78 years, male
424.0
163_1
78 years, male
422.9
404_1
82 years, female
418.0
351_1
91 years, male
416.4
177_1
74 years, male
415.7
396_1
62 years, male
414.2
17_1
71 years, male
411.2
41_1
94 years, female
410.6
265_1
87 years, male
408.3
4_1
88 years, female
408.0
6_1
73 years, female
407.5
173_1
67 years, male
406.7
347_1
72 years, male
405.4
172_1
72 years, female
404.9
349_1
83 years, male
404.9
353_1
82 years, female
404.3
335_1
73 years, female
403.2
352_1
62 years, male
401.9
145_1
84 years, male
398.2
425_1
59 years, female
396.6
229_1
69 years, female
396.5
2_1
77 years, female
393.0
264_1
73 years, female
389.8
120_1
70 years, female
388.8
316_1
62 years, male
388.4
495_1
57 years, female
385.2
356_1
87 years, female
380.4
503_1
68 years, male
379.9
266_1
85 years, male
379.6
295_1
61 years, female
377.8
350_1
84 years, female
376.7
126_1
63 years, male
376.5
217_1
76 years, male
374.5
506_1
65 years, male
372.8
317_1
60 years, male
370.6
318_1
68 years, male
370.2
254_1
77 years, female
368.8
480_1
63 years, male
368.4
307_1
66 years, female
368.1
518_1
75 years, female
366.4
293_1
68 years, female
365.4
99_1
64 years, male
365.0
311_1
78 years, male
364.4
286_1
68 years, female
363.1
517_1
88 years, male
360.2
348_1
84 years, male
353.3
292_1
71 years, male
351.2
115_1
83 years, male
347.4
42_1
85 years, male
347.3
18_1
88 years, male
345.6
308_1
70 years, female
345.4
499_1
55 years, female
345.3
139_1
64 years, female
343.3
291_1
76 years, male
341.4
109_1
81 years, female
338.9
315_1
62 years, female
337.5
314_1
67 years, male
332.5
468_1
89 years, male
329.3
288_1
66 years, female
328.8
324_1
76 years, male
325.0
142_1
61 years, female
318.1
117_1
61 years, male
316.4
162_1
79 years, female
313.5
501_1
88 years, male
308.6
466_1
57 years, female
298.8
81_1
67 years, male
297.9
9_1
66 years, female
295.7
119_1
70 years, female
285.6
415_1
77 years, female
283.3
414_1
84 years, female
272.2
32_1
67 years, male
260.4
89_1
63 years, male
259.0
313_1
79 years, female
256.2
43_1
64 years, female
233.0
491_1
89 years, female
228.6
149_1
88 years, male
223.9
413_1
59 years, female
222.7
490_1
67 years, female
221.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.