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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
21.5
nTPM
HPA Brain:
38.8
nTPM
GTEx:
21.5
nTPM
FANTOM5:
42.1
Scaled Tags Per Million
Pig:
12.1
nTPM
Mouse:
13.1
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.8
Sample id
Sample description
nTPM
Amygdala nTPM: 24.6
2517
Female, age 94, left hemisphere
35.0
1987
Female, age 91, left hemisphere
33.7
2514
Male, age 75, right hemisphere
24.6
2695
Female, age 67, right hemisphere
15.6
2814
Male, age 76, right hemisphere
14.1
Basal amygdala nTPM: 37.2
2243
Female, age 91, right hemisphere
47.8
2827
Female, age 67, right hemisphere
45.5
2685
Female, age 94, left hemisphere
41.2
2110
Male, age 80, left hemisphere
34.5
2609
Male, age 75, right hemisphere
32.7
1955
Male, age 76, both hemispheres
21.6
Central amygdala nTPM: 29.5
2239
Male, age 80, left hemisphere
38.4
2826
Female, age 94, left hemisphere
35.7
2515
Male, age 75, right hemisphere
31.0
2701
Female, age 91, right hemisphere
26.8
1905
Male, age 76, both hemispheres
15.4
Corticomedial amygdala nTPM: 38.8
2535
Female, age 67, right hemisphere
62.5
2242
Female, age 91, right hemisphere
53.0
2829
Male, age 80, left hemisphere
41.2
2429
Female, age 94, left hemisphere
31.7
2428
Male, age 75, right hemisphere
28.5
2240
Male, age 76, both hemispheres
16.0
Lateral amygdala nTPM: 33.0
2256
Male, age 80, left hemisphere
44.9
2534
Female, age 94, left hemisphere
42.6
2255
Female, age 91, right hemisphere
37.2
2516
Male, age 75, right hemisphere
28.6
2830
Female, age 67, right hemisphere
28.5
1883
Male, age 76, both hemispheres
16.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
21.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 21.5
Samples: 152
Max nTPM: 51.2
Min nTPM: 2.8
Std nTPM: 9.3
Median nTPM: 21.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
51.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
43.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
42.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
41.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
40.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
40.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
40.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
38.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
37.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
37.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
36.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
35.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
34.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
34.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
34.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
33.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
33.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
33.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
32.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
32.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
32.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
31.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
30.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
30.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
30.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
30.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
30.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
29.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
29.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
29.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
28.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
28.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
28.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
28.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
27.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
27.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
27.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
27.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
27.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
27.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
26.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
26.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
26.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
26.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
25.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
25.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
25.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
25.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
25.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
25.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
25.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
24.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
24.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
24.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
24.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
24.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
24.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
23.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
23.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
23.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
23.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
23.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
23.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
23.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
22.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
22.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
22.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
22.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
22.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
22.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
22.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
21.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
21.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
21.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
21.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
21.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
21.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
21.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
21.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
21.1
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
21.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
21.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
20.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
20.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
20.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
20.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
19.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
19.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
19.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
19.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
19.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
19.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
18.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
18.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
18.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
18.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
18.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
18.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
18.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
17.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
17.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
16.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
16.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
16.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
16.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
16.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
16.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
15.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
15.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
15.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
15.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
15.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
15.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
15.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
15.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
15.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
14.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
14.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
14.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
13.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
13.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
13.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
13.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
13.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
12.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
11.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
11.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
11.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
11.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
10.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
10.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
10.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
9.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
9.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
9.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
9.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
9.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
8.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
8.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
7.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
7.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
7.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
7.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
7.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
6.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
6.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
6.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
5.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
5.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
3.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
2.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.