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ZNF428
HPA
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  • TISSUE

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  • ZNF428
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:93.3 nTPM
HPA Brain:93.3 nTPM
GTEx:93.3 nTPM
Pig:58.3 nTPM
Mouse:9.5 nTPM
Allen mouse:0.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.3
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 77.3
1961 Female, age 42, unknown 89.3
2226 Male, age 75, left hemisphere 65.3
Dorsomedial nucleus
nTPM: 85.0
2041 Female, age 72, unknown 90.3
1989 Male, age 62, unknown 84.7
2017 Female, age 42, unknown 80.1
Lateral hypothalamic area
nTPM: 71.5
1791 Male, age 80, right hemisphere 84.1
2271 Male, age 75, both hemispheres 68.8
2228 Male, age 66, unknown 67.7
2412 Male, age 62, unknown 65.1
Mammillary body
nTPM: 69.4
1948 Female, age 72, unknown 70.9
2413 Male, age 66, unknown 70.5
1834 Female, age 42, unknown 68.9
1923 Female, age 72, unknown 68.9
1945 Male, age 80, right hemisphere 67.9
Paraventricular nucleus
nTPM: 71.8
2700 Male, age 62, unknown 71.8
Preoptic area
nTPM: 76.9
1861 Female, age 42, unknown 81.4
1907 Male, age 80, right hemisphere 80.8
2414 Female, age 72, unknown 68.4
Supraoptic nucleus
nTPM: 76.4
2835 Female, age 72, unknown 81.2
2043 Male, age 62, unknown 77.8
1894 Female, age 72, unknown 70.1
Ventromedial nucleus
nTPM: 93.3
1982 Female, age 72, unknown 95.0
1822 Female, age 42, unknown 91.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 93.3
Samples: 257

Max nTPM: 222.2
Min nTPM: 29.6
Std nTPM: 23.7
Median nTPM: 91.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 222.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 198.5
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 175.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 167.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 161.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 159.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 152.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 145.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 144.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 141.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 138.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 138.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 135.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 134.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 133.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 127.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 126.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 125.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 123.4
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 122.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 121.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 121.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 120.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 119.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 119.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 118.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 117.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 116.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 116.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 116.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 116.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 114.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 114.4
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 114.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 114.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 114.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 114.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 113.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 113.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 112.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 110.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 110.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 109.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 109.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 108.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 108.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 108.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 107.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 106.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 105.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 105.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 105.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 105.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 105.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 105.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 104.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 104.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 104.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 104.7
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 104.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 104.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 103.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 103.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 103.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 102.5
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 102.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 102.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 102.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 102.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 102.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 101.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 101.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 101.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 101.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 101.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 101.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 101.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 100.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 100.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 100.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 100.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 100.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 100.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 100.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 99.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 99.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 99.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 99.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 99.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 98.8
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 98.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 98.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 97.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 97.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 97.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 97.7
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 97.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 97.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 96.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 96.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 95.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 95.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 95.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 95.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 95.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 95.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 95.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 95.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 95.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 95.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 95.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 95.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 95.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 94.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 94.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 94.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 94.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 94.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 93.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 92.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 92.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 92.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 92.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 92.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 92.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 91.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 91.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 91.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 91.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 91.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 91.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 91.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 91.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 90.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 90.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 90.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 90.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 90.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 89.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 89.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 89.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 89.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 89.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 89.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 88.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 88.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 88.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 87.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 87.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 87.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 87.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 87.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 86.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 86.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 86.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 86.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 86.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 85.9
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 85.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 85.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 85.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 85.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 84.8
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 84.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 84.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 84.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 84.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 84.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 83.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 83.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 83.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 83.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 82.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 82.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 82.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 82.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 82.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 82.6
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 82.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 82.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 82.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 82.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 81.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 81.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 81.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 81.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 81.5
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 81.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 81.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 81.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 80.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 79.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 79.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 79.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 79.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 79.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 78.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 78.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 78.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 78.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 78.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 78.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 78.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 78.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 78.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 77.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 77.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 76.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 76.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 76.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 75.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 74.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 73.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 73.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 73.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 73.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 73.2
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 72.9
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 72.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 72.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 71.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 71.6
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 71.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 71.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 71.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 71.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 68.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 68.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 67.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 67.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 67.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 67.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 66.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 66.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 65.9
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 65.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 65.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 64.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 64.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 63.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 63.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 63.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 62.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 62.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 61.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 59.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 59.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 58.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 58.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 54.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 54.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 54.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 48.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 42.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 41.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 39.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 29.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 58.3
Samples: 4

Max nTPM: 82.1
Min nTPM: 38.7
Sample A Female 82.1
Sample B Female 59.9
Sample C Male 52.3
Sample D Male 38.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

9.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 9.5
Samples: 4

Max nTPM: 12.1
Min nTPM: 7.4
Sample A Male 10.1
Sample B Male 12.1
Sample C Female 8.4
Sample D Female 7.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.4
71493026 Antisense, RP_050913_02_A06, Mouse strain C57BL/6J (56 days, male) 0.4

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