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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1120.2 nTPM
HPA:1120.2 nTPM
GTEx:1051.0 nTPM
FANTOM5:1990.7 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA043717
Glandular cells Medium



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1120.2
overview
Female, age 68
Salivary gland sample 216
nTPM: 1149.4
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1087.2
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1123.9
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1051.0
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1051.0
Samples: 181

Max nTPM: 2249.9
Min nTPM: 548.5
Std nTPM: 207.9
Median nTPM: 1015.9
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 2249.9
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 1817.6
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 1791.4
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 1533.2
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 1494.4
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1470.3
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1466.4
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1460.6
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 1376.0
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1361.0
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1359.8
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 1348.3
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1317.7
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1314.7
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1314.7
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1313.1
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1303.5
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1299.8
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1298.3
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1297.7
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1277.9
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1272.0
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1268.6
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 1258.1
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1239.0
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1238.7
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1229.4
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1228.5
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 1227.6
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1225.1
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1213.4
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 1213.2
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1208.9
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1205.1
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1199.0
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1191.3
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1188.3
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1187.4
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1184.5
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1183.5
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1178.3
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1173.4
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 1172.3
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1165.0
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1164.7
GTEX-1445S-2926-SM-5O993 60-69 years, male 1153.2
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1144.0
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1138.1
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1136.3
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1135.2
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 1132.1
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1130.7
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 1129.4
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1124.4
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1122.4
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1122.4
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1116.9
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 1110.9
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1106.6
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1102.1
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 1097.6
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1088.5
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1084.4
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1081.9
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1074.9
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1072.1
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1071.9
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1068.3
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1067.1
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1066.8
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1065.5
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1061.8
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1053.7
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1052.9
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1051.3
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1046.5
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1038.9
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 1037.6
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 1036.2
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1035.8
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1034.8
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1034.3
GTEX-11P82-0926-SM-5986X 20-29 years, male 1028.6
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1028.5
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1027.8
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1022.8
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1022.8
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1019.7
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1017.1
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1016.2
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1015.9
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1012.7
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1010.5
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1007.5
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1004.4
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1003.5
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1002.8
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1000.0
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 997.9
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 997.3
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 997.2
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 995.1
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 994.1
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 993.6
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 993.5
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 992.9
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 991.4
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 991.4
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 989.7
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 986.6
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 984.8
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 982.5
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 981.1
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 977.6
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 977.2
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 974.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 964.9
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 964.5
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 964.1
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 962.2
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 958.6
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 957.5
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 957.2
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 954.3
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 950.5
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 947.8
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 946.5
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 946.0
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 945.5
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 945.0
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 936.8
GTEX-X261-2426-SM-4PQZU 50-59 years, male 934.3
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 931.7
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 930.9
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 927.7
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 913.5
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 912.7
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 904.4
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 897.6
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 897.1
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 892.5
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 891.0
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 889.9
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 886.0
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 884.9
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 883.8
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 879.7
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 879.4
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 878.2
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 876.7
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 873.4
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 873.0
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 866.3
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 864.9
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 862.1
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 860.8
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 858.0
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 854.2
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 852.0
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 851.9
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 851.2
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 845.2
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 840.6
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 840.0
GTEX-13O21-1926-SM-5MR39 50-59 years, male 835.4
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 826.6
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 823.7
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 816.8
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 809.3
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 804.0
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 803.8
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 798.3
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 783.3
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 781.4
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 778.9
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 762.7
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 762.0
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 739.8
GTEX-1B932-0626-SM-731EM 40-49 years, female 716.8
GTEX-178AV-1426-SM-6LLID 40-49 years, male 707.6
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 548.5
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1990.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1990.7
FF:10199-103F1 23 years, male 1990.7
Salivary gland
Scaled Tags Per Million: 1930.8
FF:10093-102C3 16-60 years, mixed 1930.8
Submaxillary gland
Scaled Tags Per Million: 1349.9
FF:10202-103F4 24 years, male 1349.9

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