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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
75.5
nTPM
HPA Brain:
83.0
nTPM
GTEx:
75.5
nTPM
FANTOM5:
78.3
Scaled Tags Per Million
Pig:
58.1
nTPM
Mouse:
96.9
nTPM
Allen mouse:
11.1
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
83.0
Sample id
Sample description
nTPM
Amygdala nTPM: 51.1
1987
Female, age 91, left hemisphere
71.1
2517
Female, age 94, left hemisphere
64.8
2514
Male, age 75, right hemisphere
45.2
2695
Female, age 67, right hemisphere
38.1
2814
Male, age 76, right hemisphere
36.2
Basal amygdala nTPM: 79.8
2243
Female, age 91, right hemisphere
115.9
2685
Female, age 94, left hemisphere
107.2
2110
Male, age 80, left hemisphere
89.9
2609
Male, age 75, right hemisphere
60.2
1955
Male, age 76, both hemispheres
55.2
2827
Female, age 67, right hemisphere
50.1
Central amygdala nTPM: 61.4
2239
Male, age 80, left hemisphere
86.5
2701
Female, age 91, right hemisphere
85.4
2826
Female, age 94, left hemisphere
48.7
1905
Male, age 76, both hemispheres
45.9
2515
Male, age 75, right hemisphere
40.2
Corticomedial amygdala nTPM: 83.0
2829
Male, age 80, left hemisphere
115.9
2429
Female, age 94, left hemisphere
97.5
2242
Female, age 91, right hemisphere
93.5
2535
Female, age 67, right hemisphere
85.8
2240
Male, age 76, both hemispheres
61.4
2428
Male, age 75, right hemisphere
43.9
Lateral amygdala nTPM: 52.5
2255
Female, age 91, right hemisphere
88.8
2256
Male, age 80, left hemisphere
57.5
2534
Female, age 94, left hemisphere
54.6
1883
Male, age 76, both hemispheres
47.2
2516
Male, age 75, right hemisphere
36.4
2830
Female, age 67, right hemisphere
30.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 75.5
Samples: 152
Max nTPM: 201.1
Min nTPM: 4.5
Std nTPM: 31.9
Median nTPM: 72.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
201.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
152.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
147.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
145.5
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
143.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
137.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
135.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
134.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
132.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
132.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
132.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
131.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
131.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
130.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
121.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
120.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
116.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
111.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
110.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
109.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
108.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
107.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
107.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
105.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
102.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
102.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
100.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
99.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
98.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
98.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
96.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
95.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
95.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
94.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
93.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
93.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
93.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
92.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
92.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
92.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
91.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
91.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
90.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
90.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
90.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
89.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
89.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
89.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
89.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
88.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
88.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
88.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
87.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
86.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
86.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
85.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
82.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
82.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
81.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
81.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
80.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
80.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
79.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
79.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
78.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
78.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
78.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
78.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
77.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
75.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
75.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
75.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
74.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
72.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
72.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
71.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
70.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
69.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
69.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
69.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
69.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
69.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
69.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
69.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
68.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
68.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
68.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
67.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
66.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
66.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
66.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
65.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
64.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
63.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
63.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
62.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
61.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
61.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
59.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
59.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
59.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
59.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
59.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
58.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
57.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
57.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
56.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
56.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
56.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
55.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
55.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
55.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
54.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
54.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
52.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
52.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
52.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
51.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
51.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
51.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
50.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
50.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
48.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
47.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
44.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
44.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
43.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
43.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
42.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
41.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
40.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
40.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
38.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
37.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
37.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
35.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
34.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
34.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
34.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
33.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
31.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
28.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
26.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
26.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
26.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
20.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
19.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
16.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
14.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
4.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
96.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 96.9
Samples: 4
Max nTPM: 118.2
Min nTPM: 83.8
Sample A
Male
83.8
Sample B
Male
92.0
Sample C
Female
118.2
Sample D
Female
93.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.