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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
93.2
nTPM
HPA Brain:
99.4
nTPM
GTEx:
93.2
nTPM
FANTOM5:
84.2
Scaled Tags Per Million
Pig:
48.4
nTPM
Mouse:
38.1
nTPM
Allen mouse:
5.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
99.4
Sample id
Sample description
nTPM
Amygdala nTPM: 99.4
2814
Male, age 76, right hemisphere
124.9
2695
Female, age 67, right hemisphere
109.6
2514
Male, age 75, right hemisphere
96.5
1987
Female, age 91, left hemisphere
96.4
2517
Female, age 94, left hemisphere
69.5
Basal amygdala nTPM: 65.6
1955
Male, age 76, both hemispheres
86.6
2609
Male, age 75, right hemisphere
78.3
2110
Male, age 80, left hemisphere
66.4
2243
Female, age 91, right hemisphere
64.9
2685
Female, age 94, left hemisphere
55.2
2827
Female, age 67, right hemisphere
42.1
Central amygdala nTPM: 76.3
1905
Male, age 76, both hemispheres
89.5
2515
Male, age 75, right hemisphere
84.8
2701
Female, age 91, right hemisphere
75.9
2826
Female, age 94, left hemisphere
73.6
2239
Male, age 80, left hemisphere
57.9
Corticomedial amygdala nTPM: 67.2
2428
Male, age 75, right hemisphere
90.8
2240
Male, age 76, both hemispheres
80.7
2242
Female, age 91, right hemisphere
76.4
2829
Male, age 80, left hemisphere
59.8
2429
Female, age 94, left hemisphere
59.0
2535
Female, age 67, right hemisphere
36.4
Lateral amygdala nTPM: 68.7
1883
Male, age 76, both hemispheres
101.8
2256
Male, age 80, left hemisphere
73.8
2516
Male, age 75, right hemisphere
69.2
2255
Female, age 91, right hemisphere
58.6
2534
Female, age 94, left hemisphere
56.6
2830
Female, age 67, right hemisphere
52.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
93.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 93.2
Samples: 152
Max nTPM: 224.4
Min nTPM: 28.6
Std nTPM: 29.5
Median nTPM: 87.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
224.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
218.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
159.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
155.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
154.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
154.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
152.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
144.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
143.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
141.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
139.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
131.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
131.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
131.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
129.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
129.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
129.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
129.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
127.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
126.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
119.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
119.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
115.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
115.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
114.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
114.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
114.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
114.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
114.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
113.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
113.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
113.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
113.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
111.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
110.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
109.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
109.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
109.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
108.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
107.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
107.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
107.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
107.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
106.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
106.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
106.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
105.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
103.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
102.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
102.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
101.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
101.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
101.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
100.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
99.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
99.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
98.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
97.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
97.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
97.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
97.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
95.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
94.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
94.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
94.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
93.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
93.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
92.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
92.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
92.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
91.9
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
90.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
90.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
90.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
89.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
88.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
86.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
86.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
86.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
86.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
86.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
86.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
85.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
84.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
84.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
84.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
84.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
83.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
83.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
83.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
82.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
82.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
81.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
81.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
81.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
81.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
81.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
81.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
81.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
80.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
79.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
79.1
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
78.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
78.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
77.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
77.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
75.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
75.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
74.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
73.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
73.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
73.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
73.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
73.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
73.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
73.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
73.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
73.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
72.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
72.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
71.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
71.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
71.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
70.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
69.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
68.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
68.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
68.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
67.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
67.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
67.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
67.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
66.5
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
66.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
62.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
62.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
61.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
60.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
59.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
57.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
57.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
56.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
56.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
54.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
51.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
50.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
48.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
45.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
42.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
41.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
28.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 38.1
Samples: 4
Max nTPM: 43.7
Min nTPM: 35.0
Sample A
Male
36.8
Sample B
Male
35.0
Sample C
Female
43.7
Sample D
Female
36.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.