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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
96.4
nTPM
HPA Brain:
129.2
nTPM
GTEx:
96.4
nTPM
FANTOM5:
301.4
Scaled Tags Per Million
Pig:
522.3
nTPM
Mouse:
721.0
nTPM
Allen mouse:
20.5
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
129.2
Sample id
Sample description
nTPM
Amygdala nTPM: 80.2
1987
Female, age 91, left hemisphere
130.4
2517
Female, age 94, left hemisphere
94.2
2514
Male, age 75, right hemisphere
77.1
2695
Female, age 67, right hemisphere
52.3
2814
Male, age 76, right hemisphere
47.3
Basal amygdala nTPM: 116.9
2243
Female, age 91, right hemisphere
176.8
2685
Female, age 94, left hemisphere
135.5
2110
Male, age 80, left hemisphere
118.1
2827
Female, age 67, right hemisphere
97.8
1955
Male, age 76, both hemispheres
90.3
2609
Male, age 75, right hemisphere
82.8
Central amygdala nTPM: 100.0
2239
Male, age 80, left hemisphere
150.7
2826
Female, age 94, left hemisphere
105.6
2701
Female, age 91, right hemisphere
99.3
2515
Male, age 75, right hemisphere
92.6
1905
Male, age 76, both hemispheres
51.5
Corticomedial amygdala nTPM: 129.2
2829
Male, age 80, left hemisphere
169.1
2242
Female, age 91, right hemisphere
163.9
2429
Female, age 94, left hemisphere
128.5
2535
Female, age 67, right hemisphere
126.9
2240
Male, age 76, both hemispheres
101.7
2428
Male, age 75, right hemisphere
84.8
Lateral amygdala nTPM: 92.5
2255
Female, age 91, right hemisphere
127.0
2534
Female, age 94, left hemisphere
120.7
2256
Male, age 80, left hemisphere
110.6
1883
Male, age 76, both hemispheres
79.3
2830
Female, age 67, right hemisphere
64.3
2516
Male, age 75, right hemisphere
52.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
96.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 96.4
Samples: 152
Max nTPM: 284.1
Min nTPM: 3.4
Std nTPM: 56.3
Median nTPM: 87.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
284.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
279.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
253.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
227.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
221.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
211.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
206.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
204.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
197.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
192.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
191.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
190.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
187.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
175.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
170.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
168.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
168.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
167.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
161.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
159.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
158.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
157.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
153.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
151.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
150.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
150.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
148.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
147.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
147.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
145.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
141.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
141.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
139.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
135.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
134.0
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
131.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
130.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
125.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
125.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
124.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
124.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
124.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
123.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
122.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
122.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
121.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
119.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
119.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
119.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
117.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
116.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
116.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
113.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
113.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
111.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
111.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
107.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
106.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
105.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
103.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
102.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
102.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
101.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
99.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
97.1
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
96.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
96.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
96.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
96.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
95.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
94.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
93.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
92.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
91.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
90.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
88.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
87.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
87.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
87.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
86.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
84.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
82.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
81.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
81.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
80.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
79.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
79.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
76.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
75.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
75.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
72.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
71.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
71.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
70.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
70.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
68.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
67.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
67.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
64.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
64.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
64.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
62.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
62.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
62.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
62.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
61.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
61.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
59.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
58.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
57.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
56.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
56.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
54.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
53.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
50.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
50.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
49.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
48.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
47.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
47.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
47.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
47.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
45.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
44.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
42.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
42.5
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
42.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
41.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
40.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
40.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
37.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
36.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
36.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
36.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
34.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
33.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
33.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
33.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
29.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
26.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
24.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
23.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
21.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
21.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
20.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
17.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
14.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
13.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
11.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
7.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
721.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 721.0
Samples: 4
Max nTPM: 773.1
Min nTPM: 686.7
Sample A
Male
686.7
Sample B
Male
773.1
Sample C
Female
687.9
Sample D
Female
736.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.