HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:24.5 nTPM
HPA Brain:26.8 nTPM
GTEx:24.5 nTPM
FANTOM5:15.5 Scaled Tags Per Million
Pig:19.4 nTPM
Mouse:64.2 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001536Antibody CAB035996
Glial cells MediumNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 26.8
Sample id Sample description nTPM
Hippocampus
nTPM: 25.3
2529 Female, age 94, left hemisphere 30.0
1898 Male, age 80, left hemisphere 29.2
2148 Female, age 91, left hemisphere 25.4
2621 Female, age 67, right hemisphere 23.3
1911 Female, age 85, right hemisphere 22.4
1855 Male, age 76, left hemisphere 21.6
Dentate gyrus
nTPM: 24.9
2010 Male, age 76, both hemispheres 34.9
2528 Male, age 74, both hemispheres 26.9
2530 Female, age 94, left hemisphere 22.8
1927 Female, age 91, both hemispheres 22.4
2246 Female, age 85, both hemispheres 22.2
2531 Female, age 67, both hemispheres 20.0
Entorhinal gyrus
nTPM: 20.6
2117 Female, age 91, right hemisphere 25.2
1787 Male, age 76, left hemisphere 22.0
2686 Male, age 75, right hemisphere 21.4
1938 Female, age 85, left hemisphere 20.3
2764 Male, age 80, right hemisphere 19.4
2613 Female, age 94, left hemisphere 15.3
Hippocampus, CA1
nTPM: 25.8
2045 Male, age 76, both hemispheres 30.2
1873 Female, age 85, both hemispheres 28.0
2749 Male, age 80, left hemisphere 26.4
2527 Male, age 74, both hemispheres 23.7
2082 Female, age 91, right hemisphere 20.5
Hippocampus, CA2
nTPM: 23.2
1963 Male, age 80, left hemisphere 26.1
2249 Male, age 74, both hemispheres 25.6
1892 Male, age 76, both hemispheres 24.5
1940 Female, age 85, left hemisphere 21.8
2113 Female, age 91, right hemisphere 21.8
2437 Female, age 94, left hemisphere 19.4
Hippocampus, CA3
nTPM: 26.8
2436 Male, age 74, both hemispheres 34.7
1867 Male, age 76, both hemispheres 32.0
2620 Female, age 94, left hemisphere 24.3
2861 Female, age 67, both hemispheres 23.9
2137 Male, age 80, left hemisphere 23.3
1891 Female, age 85, both hemispheres 22.4
Parahippocampal cortex
nTPM: 21.5
2018 Male, age 76, both hemispheres 33.1
1850 Male, age 80, both hemispheres 24.7
1990 Female, age 91, right hemisphere 22.0
1933 Female, age 85, both hemispheres 20.9
2692 Male, age 74, both hemispheres 20.8
2250 Female, age 67, right hemisphere 20.6
2245 Female, age 91, both hemispheres 19.6
2622 Female, age 67, right hemisphere 19.6
2532 Female, age 72, left hemisphere 18.0
2693 Female, age 94, both hemispheres 16.1
Perirhinal gyrus
nTPM: 20.6
1847 Female, age 91, left hemisphere 24.7
1841 Female, age 85, right hemisphere 22.0
1794 Male, age 80, right hemisphere 20.5
2521 Female, age 94, right hemisphere 19.4
2848 Male, age 76, right hemisphere 16.5
Subiculum
nTPM: 25.6
2042 Male, age 76, both hemispheres 36.7
2729 Female, age 91, right hemisphere 24.2
1901 Male, age 80, both hemispheres 23.9
2438 Female, age 94, left hemisphere 23.7
2619 Male, age 74, both hemispheres 22.9
1977 Female, age 85, both hemispheres 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.5
Samples: 197

Max nTPM: 106.7
Min nTPM: 12.2
Std nTPM: 10.8
Median nTPM: 22.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 106.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 101.2
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 62.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 57.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 54.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 49.9
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 48.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 41.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 40.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 39.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 39.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.5
FF:10153-102I9 76 years, female 18.6
FF:10169-103B7 60 years, female 12.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.4
Pig sample Sample description nTPM
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 22.1
Min nTPM: 15.4
Sample A Female 22.1
Sample B Female 17.0
Sample C Male 16.2
Sample D Male 15.4
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 23.4
Min nTPM: 15.9
Sample A Female 23.4
Sample B Female 21.6
Sample C Male 16.8
Sample D Male 15.9
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 19.2
Min nTPM: 12.7
Sample A Female 18.1
Sample B Female 19.2
Sample C Male 17.3
Sample D Male 12.7
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 22.8
Min nTPM: 16.1
Sample A Female 20.4
Sample B Female 16.1
Sample C Male 22.8
Sample D Male 16.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 64.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.0
Samples: 4

Max nTPM: 53.5
Min nTPM: 51.0
Sample A Male 51.9
Sample B Male 51.4
Sample C Female 53.5
Sample D Female 51.0
Hippocampal formation
nTPM: 64.2
Samples: 4

Max nTPM: 67.6
Min nTPM: 59.5
Sample A Male 67.6
Sample B Male 59.5
Sample C Female 65.6
Sample D Female 64.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
74583117 Antisense, RP_051214_02_F01, Mouse strain C57BL/6J (56 days, male) 6.1
68797491 Antisense, RP_050125_02_D05, Mouse strain C57BL/6J (56 days, male) 4.0

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