HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:29.5 nTPM
HPA Brain:54.8 nTPM
GTEx:29.5 nTPM
FANTOM5:36.6 Scaled Tags Per Million
Pig:46.7 nTPM
Mouse:20.6 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027066Antibody CAB000126
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 54.8
Sample id Sample description nTPM
Hippocampus
nTPM: 44.6
1898 Male, age 80, left hemisphere 58.7
2529 Female, age 94, left hemisphere 47.2
1855 Male, age 76, left hemisphere 44.2
2621 Female, age 67, right hemisphere 43.9
1911 Female, age 85, right hemisphere 43.4
2148 Female, age 91, left hemisphere 30.2
Dentate gyrus
nTPM: 41.2
2530 Female, age 94, left hemisphere 53.5
2010 Male, age 76, both hemispheres 51.9
2531 Female, age 67, both hemispheres 42.1
2528 Male, age 74, both hemispheres 37.5
2246 Female, age 85, both hemispheres 34.7
1927 Female, age 91, both hemispheres 27.7
Entorhinal gyrus
nTPM: 25.6
2686 Male, age 75, right hemisphere 37.6
1787 Male, age 76, left hemisphere 28.4
2117 Female, age 91, right hemisphere 28.0
1938 Female, age 85, left hemisphere 21.0
2613 Female, age 94, left hemisphere 19.5
2764 Male, age 80, right hemisphere 19.1
Hippocampus, CA1
nTPM: 37.2
2045 Male, age 76, both hemispheres 48.2
2527 Male, age 74, both hemispheres 45.1
2082 Female, age 91, right hemisphere 37.0
1873 Female, age 85, both hemispheres 30.1
2749 Male, age 80, left hemisphere 25.6
Hippocampus, CA2
nTPM: 48.3
1892 Male, age 76, both hemispheres 75.1
2437 Female, age 94, left hemisphere 61.9
2249 Male, age 74, both hemispheres 45.4
2113 Female, age 91, right hemisphere 40.6
1963 Male, age 80, left hemisphere 37.0
1940 Female, age 85, left hemisphere 29.7
Hippocampus, CA3
nTPM: 54.8
1867 Male, age 76, both hemispheres 83.1
1891 Female, age 85, both hemispheres 71.0
2861 Female, age 67, both hemispheres 62.6
2436 Male, age 74, both hemispheres 42.3
2137 Male, age 80, left hemisphere 37.8
2620 Female, age 94, left hemisphere 32.1
Parahippocampal cortex
nTPM: 31.4
2018 Male, age 76, both hemispheres 72.2
1990 Female, age 91, right hemisphere 33.4
2622 Female, age 67, right hemisphere 31.1
2245 Female, age 91, both hemispheres 30.4
2532 Female, age 72, left hemisphere 29.4
2692 Male, age 74, both hemispheres 26.5
1850 Male, age 80, both hemispheres 25.1
2250 Female, age 67, right hemisphere 24.9
2693 Female, age 94, both hemispheres 22.0
1933 Female, age 85, both hemispheres 19.5
Perirhinal gyrus
nTPM: 26.0
1841 Female, age 85, right hemisphere 32.6
2521 Female, age 94, right hemisphere 30.4
1794 Male, age 80, right hemisphere 24.1
1847 Female, age 91, left hemisphere 23.4
2848 Male, age 76, right hemisphere 19.6
Subiculum
nTPM: 46.9
1901 Male, age 80, both hemispheres 66.0
2438 Female, age 94, left hemisphere 56.0
2042 Male, age 76, both hemispheres 55.1
2619 Male, age 74, both hemispheres 37.7
1977 Female, age 85, both hemispheres 37.3
2729 Female, age 91, right hemisphere 29.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 29.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.5
Samples: 197

Max nTPM: 77.0
Min nTPM: 3.7
Std nTPM: 15.1
Median nTPM: 27.0
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 77.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 76.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 73.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 73.2
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 72.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 70.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 64.7
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 64.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 64.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 61.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 61.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.6
FF:10153-102I9 76 years, female 39.0
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.7
Pig sample Sample description nTPM
Subiculum
nTPM: 46.7
Samples: 4

Max nTPM: 102.3
Min nTPM: 8.8
Sample A Female 33.6
Sample B Female 8.8
Sample C Male 42.1
Sample D Male 102.3
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 13.2
Min nTPM: 6.1
Sample A Female 10.1
Sample B Female 7.7
Sample C Male 13.2
Sample D Male 6.1
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 91.2
Min nTPM: 7.8
Sample A Female 91.2
Sample B Female 35.4
Sample C Male 19.1
Sample D Male 7.8
Ventral hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 33.4
Min nTPM: 8.3
Sample A Female 9.4
Sample B Female 8.3
Sample C Male 33.4
Sample D Male 11.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 20.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 28.8
Min nTPM: 13.8
Sample A Male 17.8
Sample B Male 13.8
Sample C Female 21.9
Sample D Female 28.8
Hippocampal formation
nTPM: 8.9
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.1
Sample A Male 7.1
Sample B Male 9.2
Sample C Female 9.8
Sample D Female 9.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69201594 Antisense, RP_050317_03_C01, Mouse strain C57BL/6J (56 days, male) 4.1
72119593 Antisense, RP_051017_04_A08, Mouse strain C57BL/6J (56 days, male) 2.6

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