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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
122.4
nTPM
GTEx:
122.4
nTPM
FANTOM5:
84.8
Scaled Tags Per Million
Pig:
31.3
nTPM
Mouse:
22.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
122.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 122.4
Samples: 105
Max nTPM: 234.4
Min nTPM: 68.8
Std nTPM: 38.5
Median nTPM:
495_1
57 years, female
234.4
311_1
78 years, male
233.5
119_1
70 years, female
232.8
89_1
63 years, male
222.4
317_1
60 years, male
213.0
447_1
81 years, male
209.1
308_1
70 years, female
197.6
117_1
61 years, male
185.9
315_1
62 years, female
183.9
266_1
85 years, male
180.1
139_1
64 years, female
175.7
313_1
79 years, female
172.0
145_1
84 years, male
168.5
353_1
82 years, female
166.4
41_1
94 years, female
164.9
324_1
76 years, male
164.5
384_1
83 years, male
163.2
307_1
66 years, female
160.6
499_1
55 years, female
160.2
293_1
68 years, female
154.6
350_1
84 years, female
152.8
396_1
62 years, male
152.8
115_1
83 years, male
148.2
491_1
89 years, female
143.4
162_1
79 years, female
139.6
9_1
66 years, female
139.4
321_1
62 years, female
138.4
6_1
73 years, female
137.0
347_1
72 years, male
136.5
137_1
83 years, male
136.4
149_1
88 years, male
135.1
415_1
77 years, female
132.5
172_1
72 years, female
131.4
348_1
84 years, male
130.9
286_1
68 years, female
129.5
126_1
63 years, male
127.7
120_1
70 years, female
127.5
501_1
88 years, male
127.2
35_1
74 years, female
126.7
99_1
64 years, male
126.1
2_1
77 years, female
122.9
265_1
87 years, male
122.8
490_1
67 years, female
122.8
218_1
71 years, female
122.3
237_1
82 years, male
121.8
142_1
61 years, female
120.8
356_1
87 years, female
120.3
322_1
76 years, male
119.2
32_1
67 years, male
118.3
335_1
73 years, female
117.2
229_1
69 years, female
115.9
314_1
67 years, male
113.9
4_1
88 years, female
112.8
466_1
57 years, female
112.3
319_1
81 years, male
111.7
177_1
74 years, male
110.9
349_1
83 years, male
110.5
468_1
89 years, male
110.3
414_1
84 years, female
110.0
404_1
82 years, female
109.4
217_1
76 years, male
108.0
351_1
91 years, male
107.3
243_1
75 years, male
107.1
254_1
77 years, female
105.2
376_1
75 years, female
102.7
526_1
61 years, male
101.5
18_1
88 years, male
100.3
386_1
76 years, male
100.3
17_1
71 years, male
98.5
503_1
68 years, male
98.1
81_1
67 years, male
97.6
406_1
79 years, male
97.4
292_1
71 years, male
97.1
405_1
91 years, male
96.8
42_1
85 years, male
96.2
389_1
86 years, female
96.0
480_1
63 years, male
94.6
109_1
81 years, female
94.4
246_1
77 years, male
94.3
506_1
65 years, male
94.3
153_1
70 years, female
94.1
43_1
64 years, female
93.4
320_1
89 years, female
93.2
318_1
68 years, male
92.9
189_1
76 years, male
90.3
316_1
62 years, male
90.2
517_1
88 years, male
89.8
251_1
78 years, male
89.2
375_1
74 years, female
89.2
173_1
67 years, male
88.4
413_1
59 years, female
88.2
291_1
76 years, male
87.0
295_1
61 years, female
86.4
288_1
66 years, female
82.9
394_1
75 years, female
82.7
377_1
82 years, female
82.2
355_1
70 years, female
78.7
518_1
75 years, female
76.1
352_1
62 years, male
73.0
425_1
59 years, female
73.0
163_1
78 years, male
72.3
264_1
73 years, female
70.9
379_1
60 years, male
70.7
452_1
88 years, female
69.6
354_1
81 years, female
68.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.