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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
65.7
nTPM
HPA Brain:
92.4
nTPM
GTEx:
65.7
nTPM
FANTOM5:
101.9
Scaled Tags Per Million
Pig:
38.2
nTPM
Mouse:
25.2
nTPM
Allen mouse:
0.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
92.4
Sample id
Sample description
nTPM
Amygdala nTPM: 92.4
1987
Female, age 91, left hemisphere
134.2
2514
Male, age 75, right hemisphere
113.3
2517
Female, age 94, left hemisphere
91.3
2695
Female, age 67, right hemisphere
87.3
2814
Male, age 76, right hemisphere
36.0
Basal amygdala nTPM: 74.5
2609
Male, age 75, right hemisphere
112.9
2243
Female, age 91, right hemisphere
87.6
2685
Female, age 94, left hemisphere
70.2
2110
Male, age 80, left hemisphere
69.9
1955
Male, age 76, both hemispheres
61.3
2827
Female, age 67, right hemisphere
45.2
Central amygdala nTPM: 80.9
2515
Male, age 75, right hemisphere
132.9
2701
Female, age 91, right hemisphere
85.4
2239
Male, age 80, left hemisphere
76.4
2826
Female, age 94, left hemisphere
73.1
1905
Male, age 76, both hemispheres
36.7
Corticomedial amygdala nTPM: 89.7
2242
Female, age 91, right hemisphere
129.7
2428
Male, age 75, right hemisphere
117.3
2829
Male, age 80, left hemisphere
91.9
2429
Female, age 94, left hemisphere
74.0
2240
Male, age 76, both hemispheres
71.3
2535
Female, age 67, right hemisphere
54.0
Lateral amygdala nTPM: 69.3
2516
Male, age 75, right hemisphere
98.8
2256
Male, age 80, left hemisphere
85.8
2255
Female, age 91, right hemisphere
77.2
2534
Female, age 94, left hemisphere
57.7
1883
Male, age 76, both hemispheres
49.3
2830
Female, age 67, right hemisphere
47.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
65.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 65.7
Samples: 152
Max nTPM: 145.2
Min nTPM: 8.8
Std nTPM: 21.9
Median nTPM: 63.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
145.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
124.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
115.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
114.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
112.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
110.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
108.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
107.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
102.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
101.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
101.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
98.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
98.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
96.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
96.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
95.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
95.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
95.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
92.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
91.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
88.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
88.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
88.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
87.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
86.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
86.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
85.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
84.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
83.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
83.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
83.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
82.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
82.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
82.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
82.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
82.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
80.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
77.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
77.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
76.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
76.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
76.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
76.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
76.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
75.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
75.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
75.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
75.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
74.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
73.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
73.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
72.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
72.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
72.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
71.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
71.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
71.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
71.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
71.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
71.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
70.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
69.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
69.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
69.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
68.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
68.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
66.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
66.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
65.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
65.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
65.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
65.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
64.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
64.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
64.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
63.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
63.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
62.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
62.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
61.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
61.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
61.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
60.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
60.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
60.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
59.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
59.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
58.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
58.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
58.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
58.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
58.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
57.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
56.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
55.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
55.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
54.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
54.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
54.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
54.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
53.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
53.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
53.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
53.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
53.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
52.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
52.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
52.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
51.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
51.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
51.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
50.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
50.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
48.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
48.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
48.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
48.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
48.0
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
47.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
47.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
47.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
46.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
45.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
45.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
45.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
45.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
45.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
44.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
44.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
44.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
43.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
42.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
42.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
42.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
41.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
41.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
41.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
40.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
40.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
40.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
39.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
37.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
36.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
36.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
35.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
35.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
31.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
29.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
24.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
19.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
8.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
25.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 25.2
Samples: 4
Max nTPM: 29.2
Min nTPM: 22.8
Sample A
Male
29.2
Sample B
Male
22.8
Sample C
Female
24.5
Sample D
Female
24.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.