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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2594.5 nTPM
HPA:2035.9 nTPM
GTEx:2594.5 nTPM
FANTOM5:2942.5 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA006124
Glandular cells Medium



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2035.9
overview
Female, age 68
Salivary gland sample 216
nTPM: 1997.6
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 1868.6
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 2241.6
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2594.5
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 2594.5
Samples: 181

Max nTPM: 5858.2
Min nTPM: 1603.0
Std nTPM: 609.3
Median nTPM: 2470.0
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 5858.2
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 4881.1
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 4828.5
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 4696.8
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 4140.0
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 3904.9
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 3876.9
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 3737.0
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 3638.6
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 3626.6
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 3599.3
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 3598.3
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 3551.4
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 3548.6
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 3483.0
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 3382.4
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 3323.6
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 3311.8
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 3273.7
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 3258.8
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 3248.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 3202.5
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 3146.2
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 3097.5
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 3096.5
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 3089.4
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 3046.0
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 3045.5
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 3043.5
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 3029.2
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 3025.2
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 3022.7
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 3022.0
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 3013.5
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 3007.5
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 2983.3
GTEX-146FR-1226-SM-5MR78 60-69 years, female 2970.9
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 2968.0
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 2965.1
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 2943.1
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 2910.8
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 2906.2
GTEX-Y111-2626-SM-4TT24 50-59 years, male 2884.2
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 2871.1
GTEX-15SHV-2226-SM-6M464 60-69 years, male 2869.9
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 2867.3
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 2831.4
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 2831.2
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 2827.7
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 2778.3
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 2774.5
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 2768.9
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 2768.1
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 2761.2
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 2745.1
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 2744.7
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 2735.2
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2729.7
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 2727.8
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 2715.6
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 2689.3
GTEX-1445S-2926-SM-5O993 60-69 years, male 2687.3
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 2686.9
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 2681.0
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 2680.7
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 2674.0
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 2665.8
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 2640.7
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 2630.5
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 2626.8
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 2615.3
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 2604.3
GTEX-X261-2426-SM-4PQZU 50-59 years, male 2587.9
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 2587.6
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 2581.2
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 2577.5
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 2560.0
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 2558.4
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 2538.0
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 2535.4
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 2524.4
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 2521.6
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 2513.2
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 2504.0
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 2502.2
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 2488.7
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 2487.5
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 2474.0
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 2473.8
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 2470.0
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 2470.0
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 2468.3
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 2468.0
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 2460.6
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 2440.8
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 2440.1
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 2437.3
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 2426.0
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 2425.8
GTEX-13113-1526-SM-5EGHV 60-69 years, female 2417.8
GTEX-11P82-0926-SM-5986X 20-29 years, male 2416.8
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 2412.2
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 2403.1
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 2401.9
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 2400.5
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 2389.8
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 2389.0
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 2369.3
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 2364.2
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 2354.8
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 2350.8
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 2332.1
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 2326.6
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 2324.6
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 2319.6
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 2305.9
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 2303.2
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 2303.0
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 2301.3
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 2300.9
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 2299.6
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 2290.1
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 2283.7
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 2268.4
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 2267.5
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 2267.2
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 2266.6
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 2252.8
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 2251.0
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 2245.7
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 2244.5
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 2239.6
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 2228.7
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 2223.0
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 2217.3
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 2205.4
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 2192.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 2186.4
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 2182.3
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 2180.5
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 2179.1
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 2155.3
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 2149.4
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 2132.7
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 2131.2
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 2127.7
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 2123.1
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 2122.9
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 2112.0
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 2110.1
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 2099.8
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 2095.3
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 2095.1
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 2092.7
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 2090.9
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 2080.5
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 2075.8
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 2063.8
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 2059.5
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 2053.2
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 2050.0
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 2022.9
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 2016.1
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 1970.8
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1970.3
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1967.4
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1950.8
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1950.2
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 1939.0
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1933.1
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1904.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1877.1
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1861.1
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1842.7
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1820.3
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1789.4
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 1772.8
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1729.4
GTEX-1B932-0626-SM-731EM 40-49 years, female 1644.9
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1619.3
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1603.0
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2942.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 2942.5
FF:10199-103F1 23 years, male 2942.5
Salivary gland
Scaled Tags Per Million: 1733.6
FF:10093-102C3 16-60 years, mixed 1733.6
Submaxillary gland
Scaled Tags Per Million: 1460.5
FF:10202-103F4 24 years, male 1460.5

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