PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:90.1 nTPM
FANTOM5:89.4 Scaled Tags Per Million
Pig:61.2 nTPM
Mouse:20.2 nTPM
Allen mouse:0.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 90.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 57.1
2301 Female, age 85, both hemispheres 67.0
1984 Male, age 76, both hemispheres 61.6
2090 Male, age 80, both hemispheres 60.1
2188 Female, age 91, both hemispheres 39.6
Area postrema
nTPM: 78.1
2306 Male, age 80, both hemispheres 114.4
2054 Male, age 76, both hemispheres 66.3
2799 Male, age 61, both hemispheres 53.7
Dorsal cochlear nucleus
nTPM: 59.6
2378 Male, age 80, both hemispheres 75.2
2058 Male, age 76, both hemispheres 67.8
2802 Male, age 74, right hemisphere 60.4
2370 Male, age 61, both hemispheres 52.6
2187 Female, age 91, both hemispheres 42.0
Dorsal medullary reticular nucleus
nTPM: 45.1
2088 Male, age 76, both hemispheres 52.9
2040 Female, age 85, both hemispheres 46.4
2373 Male, age 61, both hemispheres 35.9
Dorsal motor vagal complex
nTPM: 61.5
2797 Male, age 61, both hemispheres 114.3
2185 Male, age 76, both hemispheres 73.5
2813 Female, age 72, unknown 67.0
2643 Male, age 74, both hemispheres 57.5
2844 Male, age 55, unknown 51.6
2807 Female, age 85, both hemispheres 50.5
2000 Male, age 74, unknown 43.4
2133 Female, age 91, both hemispheres 34.1
Dorsal tegmental nucleus
nTPM: 27.3
1936 Male, age 76, left hemisphere 40.7
2326 Male, age 74, both hemispheres 33.3
2083 Male, age 80, both hemispheres 28.0
2358 Male, age 61, both hemispheres 7.3
Dorsolateral tegmental area
nTPM: 28.0
2751 Female, age 85, both hemispheres 42.5
2360 Male, age 74, both hemispheres 38.6
2654 Male, age 80, both hemispheres 27.2
2141 Male, age 76, both hemispheres 26.3
2337 Male, age 61, both hemispheres 5.3
Gigantocellular reticular nuclei, medullary
nTPM: 43.2
2022 Male, age 76, right hemisphere 63.3
2314 Male, age 61, both hemispheres 54.9
1876 Female, age 85, both hemispheres 45.1
2387 Female, age 91, both hemispheres 41.8
2462 Male, age 74, both hemispheres 35.5
2310 Male, age 80, both hemispheres 18.5
Gigantocellular reticular nuclei, pars
nTPM: 35.5
2084 Female, age 85, both hemispheres 39.7
2330 Male, age 80, both hemispheres 38.5
2706 Male, age 80, both hemispheres 38.2
2336 Male, age 61, both hemispheres 31.5
2168 Male, age 76, both hemispheres 29.6
Inferior olive
nTPM: 90.1
2085 Female, age 85, both hemispheres 126.1
2563 Male, age 74, both hemispheres 109.9
2379 Male, age 80, both hemispheres 83.1
2628 Female, age 91, both hemispheres 78.7
2178 Male, age 61, both hemispheres 52.5
Kolliker-Fuse nucleus
nTPM: 45.5
2315 Male, age 76, right hemisphere 94.0
2163 Male, age 80, both hemispheres 24.5
2793 Female, age 91, left hemisphere 18.0
Lateral lemniscal nuclei
nTPM: 23.8
2169 Male, age 76, both hemispheres 40.3
2453 Male, age 74, right hemisphere 25.3
2036 Male, age 80, both hemispheres 22.9
2320 Female, age 91, left hemisphere 16.9
2746 Female, age 85, left hemisphere 13.6
Lateral medullary reticular nucleus
nTPM: 62.3
2804 Female, age 91, both hemispheres 85.7
2190 Female, age 85, both hemispheres 68.7
2852 Male, age 80, both hemispheres 67.2
2374 Male, age 61, both hemispheres 57.5
2305 Male, age 74, both hemispheres 53.0
2044 Male, age 76, both hemispheres 41.4
Lateral parabrachial nucleus
nTPM: 36.4
2139 Female, age 85, right hemisphere 57.8
2792 Male, age 76, both hemispheres 57.3
2013 Male, age 80, both hemispheres 21.3
2790 Male, age 61, both hemispheres 9.4
Lateral vestibular nucleus
nTPM: 49.7
2311 Male, age 80, both hemispheres 49.8
2184 Male, age 76, both hemispheres 49.5
Locus coeruleus
nTPM: 21.5
2317 Female, age 72, unknown 31.1
2123 Female, age 91, both hemispheres 28.2
2788 Male, age 74, unknown 25.6
1980 Male, age 76, both hemispheres 17.8
2720 Male, age 74, both hemispheres 16.3
2014 Male, age 55, unknown 15.9
2162 Male, age 80, both hemispheres 15.9
Medial olivary nucleus
nTPM: 63.0
2138 Female, age 91, both hemispheres 113.7
1943 Male, age 61, both hemispheres 51.5
2851 Male, age 80, both hemispheres 50.5
1962 Male, age 76, both hemispheres 36.5
Medial parabrachial nucleus
nTPM: 34.7
2463 Female, age 85, right hemisphere 58.7
2170 Female, age 91, both hemispheres 38.0
2786 Male, age 76, both hemispheres 33.0
2854 Male, age 80, both hemispheres 29.3
2156 Male, age 61, both hemispheres 14.3
Medial periolivary nuclei
nTPM: 31.8
2791 Male, age 74, right hemisphere 41.4
2171 Female, age 85, both hemispheres 36.5
2063 Male, age 76, both hemispheres 30.0
2458 Female, age 91, both hemispheres 27.4
2081 Male, age 80, both hemispheres 23.4
Medial vestibular nucleus
nTPM: 39.7
2803 Female, age 91, both hemispheres 48.3
2801 Male, age 74, both hemispheres 43.2
2134 Male, age 76, both hemispheres 41.4
2743 Female, age 85, both hemispheres 40.2
2093 Male, age 80, both hemispheres 37.5
2624 Male, age 61, both hemispheres 27.6
Motor facial nucleus
nTPM: 32.5
2795 Female, age 91, both hemispheres 55.6
2062 Male, age 76, both hemispheres 38.8
2365 Male, age 74, right hemisphere 38.6
2697 Female, age 85, both hemispheres 25.7
2126 Male, age 61, both hemispheres 23.0
2327 Male, age 80, both hemispheres 13.3
Motor hypoglossal nucleus
nTPM: 36.5
2277 Male, age 76, both hemispheres 51.3
2125 Female, age 91, both hemispheres 46.3
2461 Male, age 61, both hemispheres 32.2
2182 Male, age 80, both hemispheres 28.6
2132 Female, age 85, both hemispheres 23.9
Motor trigeminal nucleus
nTPM: 22.9
2309 Male, age 76, both hemispheres 37.6
2560 Male, age 74, both hemispheres 22.5
2335 Male, age 61, both hemispheres 21.4
2321 Female, age 91, both hemispheres 17.7
2079 Male, age 80, both hemispheres 15.2
Nuclei of the trapezoid body
nTPM: 33.2
2368 Female, age 91, both hemispheres 43.3
1983 Male, age 76, both hemispheres 39.1
2735 Female, age 85, both hemispheres 33.0
2159 Male, age 61, both hemispheres 27.5
2166 Male, age 80, both hemispheres 23.2
Nucleus ambiguus
nTPM: 50.5
2071 Male, age 76, both hemispheres 65.0
2096 Female, age 85, both hemispheres 36.1
Nucleus cuneatus
nTPM: 62.1
2564 Male, age 74, both hemispheres 78.2
2380 Male, age 80, both hemispheres 73.8
2100 Male, age 76, both hemispheres 70.7
2805 Female, age 91, both hemispheres 69.8
2808 Female, age 85, both hemispheres 62.5
2562 Male, age 61, both hemispheres 59.3
2376 Male, age 61, both hemispheres 52.2
2131 Male, age 76, both hemispheres 48.0
2381 Male, age 80, both hemispheres 44.2
Nucleus gracilis
nTPM: 72.2
2627 Male, age 74, both hemispheres 110.7
2299 Female, age 85, both hemispheres 58.1
2382 Male, age 80, both hemispheres 47.8
Nucleus raphe magnus
nTPM: 23.8
2455 Male, age 74, both hemispheres 41.7
2051 Male, age 76, both hemispheres 25.5
2328 Male, age 80, both hemispheres 23.7
2160 Male, age 61, both hemispheres 20.0
2459 Female, age 91, both hemispheres 18.3
2172 Female, age 85, both hemispheres 13.7
Nucleus raphe obscurus
nTPM: 56.2
2845 Female, age 85, midline 65.9
2142 Male, age 76, midline 63.1
2800 Male, age 61, midline 39.7
Nucleus raphe pallidus
nTPM: 24.8
2145 Male, age 76, midline 34.7
2183 Male, age 80, midline 27.9
1924 Male, age 61, midline 11.8
Nucleus tractus solitarii
nTPM: 40.2
2144 Female, age 91, right hemisphere 51.2
2191 Female, age 85, both hemispheres 42.2
2656 Male, age 76, both hemispheres 39.2
2307 Male, age 80, both hemispheres 28.0
Paramedian reticular nucleus
nTPM: 32.7
2052 Male, age 76, both hemispheres 40.0
2057 Male, age 80, both hemispheres 36.5
2050 Female, age 85, both hemispheres 31.9
2313 Male, age 61, both hemispheres 22.3
Parvicellular reticular nuclei
nTPM: 30.6
2095 Male, age 76, both hemispheres 36.3
2119 Male, age 80, both hemispheres 33.0
2558 Male, age 74, both hemispheres 22.5
Parvicellular reticular nuclei, medullary
nTPM: 44.7
2091 Female, age 85, both hemispheres 48.6
2181 Male, age 80, left hemisphere 47.4
2189 Female, age 91, both hemispheres 38.3
Pedunculopontine tegmental nucleus
nTPM: 24.8
1921 Female, age 85, both hemispheres 48.4
2334 Male, age 80, both hemispheres 19.6
2338 Male, age 61, both hemispheres 6.3
Peritrigeminal nucleus
nTPM: 58.8
2067 Female, age 85, both hemispheres 96.5
2136 Male, age 76, both hemispheres 45.5
2179 Male, age 61, both hemispheres 34.3
Pontine nuclei
nTPM: 20.5
1863 Male, age 55, unknown 38.4
1968 Male, age 76, left hemisphere 28.7
2109 Female, age 72, unknown 26.3
2319 Female, age 91, both hemispheres 18.7
2787 Female, age 85, both hemispheres 15.5
2454 Male, age 74, left hemisphere 12.5
2727 Male, age 61, right hemisphere 12.1
2115 Male, age 80, left hemisphere 12.0
Pontine raphe nucleus
nTPM: 27.8
2853 Male, age 76, midline 32.2
2122 Female, age 85, midline 23.5
Posteroventral cochlear nucleus
nTPM: 50.9
2371 Male, age 61, both hemispheres 71.1
2341 Male, age 80, both hemispheres 56.4
2135 Female, age 91, both hemispheres 46.8
2070 Male, age 76, both hemispheres 43.7
2752 Female, age 85, both hemispheres 36.2
Prepositus hypoglossal nucleus
nTPM: 50.6
2086 Male, age 80, both hemispheres 54.9
2855 Female, age 85, right hemisphere 46.3
Principal sensory trigeminal nucleus
nTPM: 31.2
2324 Male, age 76, both hemispheres 62.5
2158 Male, age 61, both hemispheres 28.1
2008 Male, age 80, left hemisphere 21.3
2367 Female, age 91, left hemisphere 12.8
Reticular pontine nucleus, caudal
nTPM: 24.2
2092 Male, age 76, both hemispheres 35.4
2457 Female, age 91, both hemispheres 31.3
2559 Male, age 74, both hemispheres 15.9
2332 Male, age 80, right hemisphere 14.0
Reticular pontine nucleus, oral
nTPM: 23.2
2167 Male, age 76, both hemispheres 33.9
2012 Female, age 85, both hemispheres 27.4
1939 Male, age 80, both hemispheres 23.4
2366 Female, age 91, both hemispheres 21.7
2361 Male, age 74, both hemispheres 9.5
Reticulotegmental nucleus
nTPM: 30.7
2322 Female, age 91, both hemispheres 45.6
2325 Male, age 76, both hemispheres 28.4
2333 Male, age 80, both hemispheres 26.8
2452 Male, age 74, both hemispheres 21.9
Spinal trigeminal nucleus, caudal
nTPM: 48.7
2308 Male, age 80, both hemispheres 56.4
2447 Male, age 76, both hemispheres 56.4
2642 Male, age 74, both hemispheres 47.9
2390 Female, age 91, both hemispheres 43.8
2312 Male, age 61, both hemispheres 38.8
Spinal trigeminal nucleus, interpolar
nTPM: 35.3
2386 Female, age 85, both hemispheres 39.8
2625 Male, age 61, both hemispheres 38.9
2066 Male, age 76, right hemisphere 36.8
2389 Female, age 91, both hemispheres 31.4
2033 Male, age 80, both hemispheres 29.3
Spinal trigeminal nucleus, oral
nTPM: 38.3
2737 Female, age 85, both hemispheres 48.0
1978 Male, age 76, both hemispheres 43.7
2164 Male, age 80, both hemispheres 23.1
Spinal vestibular nucleus
nTPM: 37.6
2806 Female, age 85, both hemispheres 49.2
2186 Female, age 91, both hemispheres 44.4
2748 Male, age 76, both hemispheres 41.8
2796 Male, age 61, both hemispheres 33.3
2780 Male, age 80, both hemispheres 29.4
2384 Male, age 74, both hemispheres 27.3
Subcoeruleus area
nTPM: 28.5
2369 Female, age 85, left hemisphere 46.1
2451 Male, age 74, both hemispheres 27.5
2089 Male, age 76, left hemisphere 25.4
1958 Male, age 80, both hemispheres 22.1
2323 Female, age 91, left hemisphere 21.6
Superior olive
nTPM: 29.9
2364 Male, age 74, right hemisphere 41.6
2020 Male, age 76, both hemispheres 35.1
1875 Female, age 85, both hemispheres 27.3
2561 Female, age 91, both hemispheres 23.7
2329 Male, age 80, right hemisphere 22.1
Superior vestibular nucleus
nTPM: 63.2
2061 Male, age 76, both hemispheres 72.6
2383 Male, age 74, both hemispheres 70.0
2015 Male, age 80, both hemispheres 47.1
Ventral medullary reticular nucleus
nTPM: 46.7
2372 Male, age 61, both hemispheres 48.0
2060 Male, age 76, both hemispheres 45.4
Ventral periolivary nuclei
nTPM: 30.1
2130 Female, age 85, both hemispheres 47.5
2023 Male, age 76, both hemispheres 28.9
2165 Male, age 80, both hemispheres 28.5
2794 Female, age 91, left hemisphere 15.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 46.2
2302 Female, age 91, both hemispheres 72.3
2741 Female, age 85, both hemispheres 47.3
1986 Male, age 76, both hemispheres 41.6
2180 Male, age 61, both hemispheres 37.5
2118 Male, age 80, both hemispheres 32.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 26.7
2456 Female, age 91, both hemispheres 34.1
2840 Female, age 85, both hemispheres 33.4
1959 Male, age 76, both hemispheres 31.5
2449 Male, age 74, both hemispheres 30.8
2161 Male, age 80, both hemispheres 22.3
2359 Male, age 61, both hemispheres 8.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 89.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 57.7
FF:10182-103D2 60 years, female 94.0
FF:10165-103B3 76 years, female 21.4
Medulla oblongata
Scaled Tags Per Million: 89.4
FF:10174-103C3 60 years, female 116.3
FF:10038-101F2 18-64 years, mixed 97.2
FF:10155-103A2 76 years, female 54.8
Pons
Scaled Tags Per Million: 39.5
FF:10033-101E6 18-54 years, mixed 39.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 61.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 61.2
Samples: 4

Max nTPM: 106.3
Min nTPM: 19.4
Sample A Female 43.3
Sample B Female 106.3
Sample C Male 75.8
Sample D Male 19.4
Pons
nTPM: 46.3
Samples: 4

Max nTPM: 87.5
Min nTPM: 23.9
Sample A Female 33.4
Sample B Female 23.9
Sample C Male 40.2
Sample D Male 87.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 20.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 20.2
Samples: 4

Max nTPM: 21.8
Min nTPM: 18.4
Sample A Male 21.4
Sample B Male 18.4
Sample C Female 19.1
Sample D Female 21.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
70429220 Antisense, RP_050614_01_C05, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.2
70429220 Antisense, RP_050614_01_C05, Mouse strain C57BL/6J (56 days, male) 0.2

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