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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
211.8
nTPM
HPA Brain:
178.4
nTPM
GTEx:
211.8
nTPM
FANTOM5:
180.6
Scaled Tags Per Million
Pig:
76.5
nTPM
Mouse:
10.3
nTPM
Allen mouse:
6.7
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
178.4
Sample id
Sample description
nTPM
Amygdala nTPM: 170.9
2695
Female, age 67, right hemisphere
211.8
2814
Male, age 76, right hemisphere
167.3
2514
Male, age 75, right hemisphere
164.5
1987
Female, age 91, left hemisphere
161.0
2517
Female, age 94, left hemisphere
150.0
Basal amygdala nTPM: 161.8
2609
Male, age 75, right hemisphere
200.4
2827
Female, age 67, right hemisphere
176.3
2110
Male, age 80, left hemisphere
160.9
2243
Female, age 91, right hemisphere
146.7
2685
Female, age 94, left hemisphere
146.6
1955
Male, age 76, both hemispheres
139.9
Central amygdala nTPM: 170.9
2826
Female, age 94, left hemisphere
217.4
2515
Male, age 75, right hemisphere
195.0
2239
Male, age 80, left hemisphere
155.7
1905
Male, age 76, both hemispheres
151.9
2701
Female, age 91, right hemisphere
134.7
Corticomedial amygdala nTPM: 145.2
2535
Female, age 67, right hemisphere
165.2
2428
Male, age 75, right hemisphere
160.4
2829
Male, age 80, left hemisphere
156.1
2242
Female, age 91, right hemisphere
139.8
2429
Female, age 94, left hemisphere
129.5
2240
Male, age 76, both hemispheres
120.5
Lateral amygdala nTPM: 178.4
2830
Female, age 67, right hemisphere
205.2
2516
Male, age 75, right hemisphere
199.9
2534
Female, age 94, left hemisphere
173.8
2256
Male, age 80, left hemisphere
169.5
2255
Female, age 91, right hemisphere
168.9
1883
Male, age 76, both hemispheres
152.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
211.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 211.8
Samples: 152
Max nTPM: 438.4
Min nTPM: 50.7
Std nTPM: 47.4
Median nTPM: 210.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
438.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
335.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
324.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
312.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
312.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
300.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
290.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
287.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
287.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
282.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
282.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
278.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
276.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
275.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
275.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
269.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
265.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
265.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
263.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
261.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
260.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
258.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
257.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
253.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
253.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
250.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
249.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
247.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
247.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
247.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
243.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
243.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
242.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
241.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
241.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
241.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
240.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
238.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
236.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
233.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
230.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
229.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
229.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
229.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
228.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
228.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
227.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
227.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
226.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
226.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
225.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
225.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
225.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
224.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
223.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
223.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
223.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
222.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
222.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
222.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
221.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
219.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
219.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
217.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
216.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
216.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
216.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
215.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
215.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
214.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
214.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
212.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
211.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
211.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
210.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
210.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
210.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
210.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
209.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
208.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
208.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
205.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
205.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
205.4
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
204.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
204.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
204.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
203.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
201.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
199.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
199.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
198.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
198.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
198.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
196.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
194.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
193.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
192.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
191.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
191.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
190.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
189.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
188.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
188.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
188.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
187.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
187.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
187.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
186.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
185.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
184.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
183.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
182.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
182.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
182.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
182.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
181.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
178.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
178.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
177.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
176.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
175.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
173.8
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
173.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
172.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
171.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
170.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
166.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
166.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
166.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
165.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
163.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
162.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
160.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
156.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
154.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
153.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
153.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
153.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
152.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
149.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
148.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
146.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
146.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
144.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
141.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
137.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
134.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
132.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
130.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
129.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
50.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
10.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 10.3
Samples: 4
Max nTPM: 13.7
Min nTPM: 7.2
Sample A
Male
12.4
Sample B
Male
8.0
Sample C
Female
13.7
Sample D
Female
7.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.