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  • RPL18A
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
Tissue methods
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:2247.0 nTPM
GTEx:2247.0 nTPM
FANTOM5:5.5 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA055259
Squamous epithelial cells Medium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2247.0
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 2247.0
Samples: 170

Max nTPM: 5499.1
Min nTPM: 1121.1
Std nTPM: 641.9
Median nTPM: 2216.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 5499.1
GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 5007.7
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 3987.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 3978.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 3835.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 3565.8
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 3556.3
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 3366.1
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 3328.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 3317.1
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 3299.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 3266.0
GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 3226.8
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 3069.1
GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 3012.7
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 2999.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2938.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 2919.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 2914.8
GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 2877.8
GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 2828.0
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 2818.2
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 2818.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 2804.4
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 2792.2
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 2788.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 2782.3
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 2756.5
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 2754.0
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 2738.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2727.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 2723.2
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 2723.2
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2684.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 2674.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 2672.3
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 2668.0
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 2658.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 2640.5
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 2605.0
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 2557.6
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 2531.5
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2515.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 2509.3
GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 2458.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 2432.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 2422.2
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 2416.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 2410.1
GTEX-S4UY-1026-SM-4AD53 40-49 years, female 2406.3
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 2404.3
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 2395.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 2394.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 2393.1
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 2388.9
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 2379.5
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 2371.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2370.0
GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 2366.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 2361.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 2337.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2331.5
GTEX-11I78-2026-SM-5987C 50-59 years, female 2325.1
GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 2322.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 2304.0
GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 2299.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 2296.7
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 2293.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 2292.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 2287.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 2286.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 2285.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 2282.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 2274.6
GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 2271.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 2270.9
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 2267.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 2265.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 2258.2
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 2251.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 2244.5
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2236.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 2221.0
GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 2220.7
GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 2219.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 2213.7
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 2192.1
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 2179.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 2168.5
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 2168.3
GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 2161.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 2158.3
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 2152.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 2143.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 2127.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 2121.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 2101.9
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 2099.1
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 2085.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2085.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 2079.0
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 2067.5
GTEX-S341-1226-SM-4AD5S 40-49 years, female 2049.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 2047.1
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2035.7
GTEX-RNOR-2526-SM-F21KT 50-59 years, female 2026.2
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 2011.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 2005.5
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 1990.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 1988.6
GTEX-QCQG-1226-SM-48U23 50-59 years, female 1951.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1944.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1937.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 1932.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1921.5
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 1911.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 1906.1
GTEX-147F3-1526-SM-5MR7L 50-59 years, female 1904.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1898.0
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1897.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 1876.0
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 1859.7
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1833.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1825.8
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 1821.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 1815.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 1813.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1813.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1795.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 1780.2
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 1771.7
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1755.1
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 1742.7
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 1739.4
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1733.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 1703.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1703.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 1700.7
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 1695.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1686.7
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 1680.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1674.1
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 1671.4
GTEX-14A5I-2726-SM-5MR84 50-59 years, female 1664.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 1660.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1650.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 1630.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 1629.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 1616.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 1606.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 1577.1
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 1564.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 1560.2
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1547.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 1509.4
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 1505.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 1497.2
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 1496.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1486.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 1452.3
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1447.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 1446.6
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 1426.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1390.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 1363.3
GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 1249.0
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 1235.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 1224.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 1220.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1121.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 5.5
FF:10204-103F6 68 years, female 5.5

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