HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:23.5 nTPM
HPA Brain:37.7 nTPM
GTEx:23.5 nTPM
FANTOM5:68.3 Scaled Tags Per Million
Pig:36.0 nTPM
Mouse:29.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042843Antibody HPA049439
Glial cells MediumLow
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.7
Sample id Sample description nTPM
Hippocampus
nTPM: 35.9
2621 Female, age 67, right hemisphere 43.5
2529 Female, age 94, left hemisphere 41.1
1855 Male, age 76, left hemisphere 37.2
2148 Female, age 91, left hemisphere 33.2
1911 Female, age 85, right hemisphere 33.0
1898 Male, age 80, left hemisphere 27.3
Dentate gyrus
nTPM: 34.9
2530 Female, age 94, left hemisphere 40.0
2531 Female, age 67, both hemispheres 39.6
2010 Male, age 76, both hemispheres 37.5
2246 Female, age 85, both hemispheres 35.3
1927 Female, age 91, both hemispheres 28.8
2528 Male, age 74, both hemispheres 28.2
Entorhinal gyrus
nTPM: 37.7
2686 Male, age 75, right hemisphere 43.1
2613 Female, age 94, left hemisphere 39.4
1787 Male, age 76, left hemisphere 37.9
2117 Female, age 91, right hemisphere 37.3
2764 Male, age 80, right hemisphere 35.3
1938 Female, age 85, left hemisphere 33.1
Hippocampus, CA1
nTPM: 31.8
2045 Male, age 76, both hemispheres 35.1
1873 Female, age 85, both hemispheres 34.1
2527 Male, age 74, both hemispheres 31.1
2082 Female, age 91, right hemisphere 30.9
2749 Male, age 80, left hemisphere 27.9
Hippocampus, CA2
nTPM: 30.6
2113 Female, age 91, right hemisphere 35.2
1940 Female, age 85, left hemisphere 33.9
2437 Female, age 94, left hemisphere 32.4
1892 Male, age 76, both hemispheres 30.3
2249 Male, age 74, both hemispheres 27.2
1963 Male, age 80, left hemisphere 24.8
Hippocampus, CA3
nTPM: 35.7
2620 Female, age 94, left hemisphere 48.2
2861 Female, age 67, both hemispheres 44.7
1867 Male, age 76, both hemispheres 34.9
1891 Female, age 85, both hemispheres 34.3
2137 Male, age 80, left hemisphere 28.3
2436 Male, age 74, both hemispheres 23.8
Parahippocampal cortex
nTPM: 37.7
2622 Female, age 67, right hemisphere 53.0
2245 Female, age 91, both hemispheres 42.2
2532 Female, age 72, left hemisphere 41.9
2692 Male, age 74, both hemispheres 39.3
2018 Male, age 76, both hemispheres 37.6
1990 Female, age 91, right hemisphere 33.9
2693 Female, age 94, both hemispheres 33.9
2250 Female, age 67, right hemisphere 32.3
1933 Female, age 85, both hemispheres 32.0
1850 Male, age 80, both hemispheres 31.2
Perirhinal gyrus
nTPM: 31.1
2848 Male, age 76, right hemisphere 36.5
1794 Male, age 80, right hemisphere 33.8
1841 Female, age 85, right hemisphere 29.0
1847 Female, age 91, left hemisphere 28.4
2521 Female, age 94, right hemisphere 28.0
Subiculum
nTPM: 37.1
2619 Male, age 74, both hemispheres 46.3
2042 Male, age 76, both hemispheres 41.3
2438 Female, age 94, left hemisphere 37.2
1901 Male, age 80, both hemispheres 35.6
1977 Female, age 85, both hemispheres 31.5
2729 Female, age 91, right hemisphere 30.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 23.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.5
Samples: 197

Max nTPM: 49.8
Min nTPM: 10.5
Std nTPM: 6.5
Median nTPM: 23.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 47.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 41.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 37.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 37.5
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 37.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 36.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 36.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 34.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 34.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 34.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 68.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.3
FF:10169-103B7 60 years, female 78.9
FF:10153-102I9 76 years, female 57.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 36.0
Pig sample Sample description nTPM
Subiculum
nTPM: 30.9
Samples: 4

Max nTPM: 37.2
Min nTPM: 26.9
Sample A Female 37.2
Sample B Female 26.9
Sample C Male 32.1
Sample D Male 27.2
Dorsal hippocampus
nTPM: 36.0
Samples: 4

Max nTPM: 41.4
Min nTPM: 31.0
Sample A Female 41.4
Sample B Female 33.2
Sample C Male 38.3
Sample D Male 31.0
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 35.2
Min nTPM: 26.0
Sample A Female 35.2
Sample B Female 26.0
Sample C Male 27.6
Sample D Male 28.5
Ventral hippocampus
nTPM: 33.1
Samples: 4

Max nTPM: 42.1
Min nTPM: 24.1
Sample A Female 31.9
Sample B Female 24.1
Sample C Male 42.1
Sample D Male 34.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 27.7
Min nTPM: 20.7
Sample A Male 20.7
Sample B Male 22.9
Sample C Female 22.8
Sample D Female 27.7
Hippocampal formation
nTPM: 29.7
Samples: 4

Max nTPM: 32.3
Min nTPM: 27.1
Sample A Male 27.1
Sample B Male 27.8
Sample C Female 31.5
Sample D Female 32.3

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