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  • TISSUE

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  • ECH1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

67.502
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:115.9 nTPM
HPA Brain:38.4 nTPM
GTEx:115.9 nTPM
Pig:25.1 nTPM
Mouse:67.8 nTPM
Allen mouse:2.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA005835
Hypothalamus mean intensity 67.502
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 3.848
Mammillary nucleus 10.760
Periventricular hypothalamic nucleus 22.206
Supraoptic nucleus 42.664
Tuberal nucleus 17.796
Ventral tuberomammillary nucleus -
Lateral preoptic area 0.706
Medial preoptic area 34.237
Suprachiasmatic nucleus 14.039
Paraventricular hypothalamic nucleus 11.730
Anterior hypothalamic area, central 1.242
Ventral medial hypothalamic nucleus 16.034
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 67.502
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 3.622
Dorsal medial hypothalamic nucleus 2.631
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 33.5
1961 Female, age 42, unknown 37.1
2226 Male, age 75, left hemisphere 30.0
Dorsomedial nucleus
nTPM: 38.4
1989 Male, age 62, unknown 42.2
2041 Female, age 72, unknown 39.4
2017 Female, age 42, unknown 33.8
Lateral hypothalamic area
nTPM: 34.0
1791 Male, age 80, right hemisphere 40.4
2271 Male, age 75, both hemispheres 33.8
2228 Male, age 66, unknown 32.1
2412 Male, age 62, unknown 30.0
Mammillary body
nTPM: 37.6
2413 Male, age 66, unknown 43.8
1945 Male, age 80, right hemisphere 40.1
1923 Female, age 72, unknown 39.3
1948 Female, age 72, unknown 32.5
1834 Female, age 42, unknown 32.2
Paraventricular nucleus
nTPM: 29.6
2700 Male, age 62, unknown 29.6
Preoptic area
nTPM: 33.6
1861 Female, age 42, unknown 34.4
2414 Female, age 72, unknown 34.0
1907 Male, age 80, right hemisphere 32.5
Supraoptic nucleus
nTPM: 35.0
1894 Female, age 72, unknown 37.4
2835 Female, age 72, unknown 35.1
2043 Male, age 62, unknown 32.4
Ventromedial nucleus
nTPM: 37.2
1982 Female, age 72, unknown 41.8
1822 Female, age 42, unknown 32.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 115.9
Samples: 257

Max nTPM: 212.7
Min nTPM: 63.1
Std nTPM: 21.9
Median nTPM: 114.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 212.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 196.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 188.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 182.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 175.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 172.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 172.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 171.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 166.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 160.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 155.9
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 153.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 153.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 152.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 151.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 147.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 147.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 147.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 145.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 145.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 144.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 143.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 143.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 143.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 143.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 142.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 142.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 140.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 140.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 139.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 139.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 138.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 137.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 137.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 137.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 137.1
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 136.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 136.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 136.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 135.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 135.2
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 134.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 134.2
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 133.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 132.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 132.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 131.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 131.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 131.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 130.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 130.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 130.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 129.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 129.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 128.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 128.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 128.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 127.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 126.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 125.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 125.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 125.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 125.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 124.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 124.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 124.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 124.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 124.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 124.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 124.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 124.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 124.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 124.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 123.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 123.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 123.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 123.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 123.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 123.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 122.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 122.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 122.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 121.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 121.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 121.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 121.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 121.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 120.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 120.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 120.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 120.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 119.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 119.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 119.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 119.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 119.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 119.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 119.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 119.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 118.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 118.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 118.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 118.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 117.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 117.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 117.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 117.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 117.1
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 116.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 116.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 116.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 116.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 116.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 116.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 116.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 116.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 116.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 115.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 115.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 115.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 115.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 115.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 115.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 115.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 115.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 114.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 114.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 114.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 114.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 113.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 113.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 113.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 113.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 113.2
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 112.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 112.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 112.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 112.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 112.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 112.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 112.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 111.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 111.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 111.5
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 111.2
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 110.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 110.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 110.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 110.5
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 110.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 110.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 110.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 110.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 109.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 109.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 108.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 108.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 108.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 108.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 108.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 108.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 108.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 107.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 107.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 107.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 107.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 107.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 106.9
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 106.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 106.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 106.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 105.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 105.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 105.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 105.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 105.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 105.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 105.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 104.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 104.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 104.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 104.4
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 104.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 104.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 104.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 104.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 104.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 104.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 103.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 103.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 103.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 103.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 103.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 103.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 102.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 102.4
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 101.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 101.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 101.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 101.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 101.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 100.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 100.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 100.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 100.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 100.6
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 100.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 100.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 100.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 99.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 97.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 97.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 97.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 96.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 96.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 95.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 95.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 95.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 94.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 93.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 93.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 93.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 93.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 92.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 92.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 92.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 91.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 91.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 90.9
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 90.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 89.8
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 89.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 89.0
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 89.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 88.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 87.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 87.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 86.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 86.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 86.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 85.8
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 85.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 84.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 84.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 83.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 83.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 82.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 81.7
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 81.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 81.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 75.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 73.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 73.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 70.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 64.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 63.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 25.2
Samples: 4

Max nTPM: 29.6
Min nTPM: 17.4
Sample A Female 28.9
Sample B Female 24.7
Sample C Male 29.6
Sample D Male 17.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 67.8
Samples: 4

Max nTPM: 71.9
Min nTPM: 64.6
Sample A Male 69.8
Sample B Male 71.9
Sample C Female 64.6
Sample D Female 64.7

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.2
69671863 Antisense, RP_050428_02_E05, Mouse strain C57BL/6J (56 days, male) 2.2

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