HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:209.5 nTPM
HPA Brain:340.3 nTPM
GTEx:209.5 nTPM
FANTOM5:778.4 Scaled Tags Per Million
Pig:592.4 nTPM
Mouse:467.9 nTPM
Allen mouse:18.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 340.3
Sample id Sample description nTPM
Hippocampus
nTPM: 194.1
1898 Male, age 80, left hemisphere 291.2
2621 Female, age 67, right hemisphere 272.2
1855 Male, age 76, left hemisphere 174.8
2148 Female, age 91, left hemisphere 159.1
1911 Female, age 85, right hemisphere 154.0
2529 Female, age 94, left hemisphere 113.6
Dentate gyrus
nTPM: 204.7
1927 Female, age 91, both hemispheres 289.9
2530 Female, age 94, left hemisphere 259.6
2246 Female, age 85, both hemispheres 203.3
2010 Male, age 76, both hemispheres 189.7
2528 Male, age 74, both hemispheres 148.9
2531 Female, age 67, both hemispheres 136.7
Entorhinal gyrus
nTPM: 235.3
2764 Male, age 80, right hemisphere 314.5
2613 Female, age 94, left hemisphere 290.3
2686 Male, age 75, right hemisphere 247.0
1938 Female, age 85, left hemisphere 244.8
1787 Male, age 76, left hemisphere 209.9
2117 Female, age 91, right hemisphere 105.2
Hippocampus, CA1
nTPM: 239.5
2749 Male, age 80, left hemisphere 437.7
2527 Male, age 74, both hemispheres 261.6
1873 Female, age 85, both hemispheres 246.2
2082 Female, age 91, right hemisphere 144.4
2045 Male, age 76, both hemispheres 107.8
Hippocampus, CA2
nTPM: 232.9
1892 Male, age 76, both hemispheres 363.9
1963 Male, age 80, left hemisphere 294.6
2437 Female, age 94, left hemisphere 235.6
2249 Male, age 74, both hemispheres 188.8
1940 Female, age 85, left hemisphere 162.7
2113 Female, age 91, right hemisphere 151.5
Hippocampus, CA3
nTPM: 207.4
2137 Male, age 80, left hemisphere 276.4
1867 Male, age 76, both hemispheres 240.7
2436 Male, age 74, both hemispheres 227.0
2861 Female, age 67, both hemispheres 180.9
1891 Female, age 85, both hemispheres 168.6
2620 Female, age 94, left hemisphere 150.7
Parahippocampal cortex
nTPM: 288.5
2245 Female, age 91, both hemispheres 456.2
2250 Female, age 67, right hemisphere 355.7
1850 Male, age 80, both hemispheres 330.6
1933 Female, age 85, both hemispheres 317.2
2693 Female, age 94, both hemispheres 302.3
1990 Female, age 91, right hemisphere 290.1
2622 Female, age 67, right hemisphere 246.0
2532 Female, age 72, left hemisphere 238.9
2692 Male, age 74, both hemispheres 174.6
2018 Male, age 76, both hemispheres 173.0
Perirhinal gyrus
nTPM: 340.3
1847 Female, age 91, left hemisphere 491.9
2521 Female, age 94, right hemisphere 351.3
2848 Male, age 76, right hemisphere 300.4
1841 Female, age 85, right hemisphere 279.1
1794 Male, age 80, right hemisphere 279.0
Subiculum
nTPM: 198.1
2438 Female, age 94, left hemisphere 293.5
1901 Male, age 80, both hemispheres 249.7
1977 Female, age 85, both hemispheres 239.5
2619 Male, age 74, both hemispheres 197.7
2042 Male, age 76, both hemispheres 115.3
2729 Female, age 91, right hemisphere 92.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 209.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 209.5
Samples: 255

Max nTPM: 649.5
Min nTPM: 11.9
Std nTPM: 149.2
Median nTPM: 179.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 649.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 619.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 613.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 602.4
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 559.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 558.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 543.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 531.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 531.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 520.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 514.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 778.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 778.4
FF:10169-103B7 60 years, female 1151.7
FF:10153-102I9 76 years, female 405.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 592.4
Pig sample Sample description nTPM
Subiculum
nTPM: 592.4
Samples: 4

Max nTPM: 748.5
Min nTPM: 498.4
Sample A Female 748.5
Sample B Female 498.4
Sample C Male 511.9
Sample D Male 610.6
Dorsal hippocampus
nTPM: 505.3
Samples: 4

Max nTPM: 667.5
Min nTPM: 391.0
Sample A Female 667.5
Sample B Female 504.9
Sample C Male 457.9
Sample D Male 391.0
Entorhinal cortex
nTPM: 556.4
Samples: 4

Max nTPM: 615.8
Min nTPM: 530.9
Sample A Female 615.8
Sample B Female 542.6
Sample C Male 536.2
Sample D Male 530.9
Ventral hippocampus
nTPM: 437.8
Samples: 4

Max nTPM: 621.7
Min nTPM: 300.3
Sample A Female 621.7
Sample B Female 300.3
Sample C Male 476.5
Sample D Male 352.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 467.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 467.9
Samples: 4

Max nTPM: 530.4
Min nTPM: 406.4
Sample A Male 406.4
Sample B Male 468.4
Sample C Female 466.5
Sample D Female 530.4
Hippocampal formation
nTPM: 441.7
Samples: 4

Max nTPM: 492.9
Min nTPM: 416.9
Sample A Male 492.9
Sample B Male 419.4
Sample C Female 437.6
Sample D Female 416.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
69173415 Antisense, RP_050329_01_E10, Mouse strain C57BL/6J (56 days, male) 18.5
74819695 Antisense, RP_060315_02_H11, Mouse strain C57BL/6J (56 days, male) 17.5

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