HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:16.8 nTPM
HPA Brain:53.0 nTPM
GTEx:16.8 nTPM
FANTOM5:55.6 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:23.9 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041330
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 53.0
Sample id Sample description nTPM
Hippocampus
nTPM: 50.3
2148 Female, age 91, left hemisphere 53.7
1911 Female, age 85, right hemisphere 52.8
1898 Male, age 80, left hemisphere 50.7
2529 Female, age 94, left hemisphere 50.7
2621 Female, age 67, right hemisphere 48.0
1855 Male, age 76, left hemisphere 46.0
Dentate gyrus
nTPM: 48.1
2010 Male, age 76, both hemispheres 51.6
2531 Female, age 67, both hemispheres 50.0
1927 Female, age 91, both hemispheres 49.0
2530 Female, age 94, left hemisphere 48.9
2528 Male, age 74, both hemispheres 46.8
2246 Female, age 85, both hemispheres 42.1
Entorhinal gyrus
nTPM: 46.6
2117 Female, age 91, right hemisphere 53.3
2764 Male, age 80, right hemisphere 50.2
2613 Female, age 94, left hemisphere 47.9
1787 Male, age 76, left hemisphere 45.8
2686 Male, age 75, right hemisphere 41.7
1938 Female, age 85, left hemisphere 40.8
Hippocampus, CA1
nTPM: 53.0
2749 Male, age 80, left hemisphere 73.0
1873 Female, age 85, both hemispheres 51.7
2045 Male, age 76, both hemispheres 49.7
2082 Female, age 91, right hemisphere 46.8
2527 Male, age 74, both hemispheres 43.9
Hippocampus, CA2
nTPM: 47.4
1963 Male, age 80, left hemisphere 53.6
1892 Male, age 76, both hemispheres 48.2
1940 Female, age 85, left hemisphere 46.3
2113 Female, age 91, right hemisphere 45.7
2249 Male, age 74, both hemispheres 45.4
2437 Female, age 94, left hemisphere 45.3
Hippocampus, CA3
nTPM: 49.1
2137 Male, age 80, left hemisphere 57.1
2620 Female, age 94, left hemisphere 51.3
2861 Female, age 67, both hemispheres 49.0
1891 Female, age 85, both hemispheres 45.8
1867 Male, age 76, both hemispheres 45.7
2436 Male, age 74, both hemispheres 45.5
Parahippocampal cortex
nTPM: 44.1
1990 Female, age 91, right hemisphere 49.2
2622 Female, age 67, right hemisphere 48.7
2692 Male, age 74, both hemispheres 47.3
2018 Male, age 76, both hemispheres 47.0
2245 Female, age 91, both hemispheres 46.6
2532 Female, age 72, left hemisphere 44.2
1933 Female, age 85, both hemispheres 41.2
2250 Female, age 67, right hemisphere 40.9
1850 Male, age 80, both hemispheres 40.6
2693 Female, age 94, both hemispheres 35.7
Perirhinal gyrus
nTPM: 41.6
1794 Male, age 80, right hemisphere 47.4
1847 Female, age 91, left hemisphere 42.8
1841 Female, age 85, right hemisphere 42.5
2521 Female, age 94, right hemisphere 39.1
2848 Male, age 76, right hemisphere 36.3
Subiculum
nTPM: 47.4
2042 Male, age 76, both hemispheres 53.8
1901 Male, age 80, both hemispheres 48.0
2438 Female, age 94, left hemisphere 47.4
2729 Female, age 91, right hemisphere 46.5
2619 Male, age 74, both hemispheres 46.1
1977 Female, age 85, both hemispheres 42.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.8
Samples: 197

Max nTPM: 34.1
Min nTPM: 6.6
Std nTPM: 4.1
Median nTPM: 16.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 30.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 27.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 27.7
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 26.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 24.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 24.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 24.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.6
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 51.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.0
Pig sample Sample description nTPM
Subiculum
nTPM: 12.9
Samples: 4

Max nTPM: 15.1
Min nTPM: 11.6
Sample A Female 15.1
Sample B Female 11.6
Sample C Male 12.5
Sample D Male 12.5
Dorsal hippocampus
nTPM: 13.7
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.2
Sample A Female 16.2
Sample B Female 14.1
Sample C Male 13.4
Sample D Male 11.2
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 13.8
Min nTPM: 11.5
Sample A Female 13.8
Sample B Female 11.9
Sample C Male 11.5
Sample D Male 12.2
Ventral hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.5
Sample A Female 13.3
Sample B Female 10.5
Sample C Male 16.5
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 23.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 25.5
Min nTPM: 21.2
Sample A Male 21.6
Sample B Male 23.5
Sample C Female 21.2
Sample D Female 25.5
Hippocampal formation
nTPM: 23.9
Samples: 4

Max nTPM: 27.9
Min nTPM: 20.1
Sample A Male 20.1
Sample B Male 25.4
Sample C Female 27.9
Sample D Female 22.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68632038 Antisense, RP_050125_01_E12, Mouse strain C57BL/6J (56 days, male) 1.1
100144874 Antisense, RP_110519_02_A01, Mouse strain C57BL/6J (56 days, male) 0.1

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