COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Medium
Glandular cells: High
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:52.5 nTPM
HPA:52.5 nTPM
GTEx:39.8 nTPM
FANTOM5:64.9 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells050100150200250nCPM

COLON - Antibody stainingi
Antibody HPA052488
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Medium


COLON - HPA RNA-seqi
Average nTPMi 52.5
overview
Male, age 54
Colon sample 67
nTPM: 49.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 50.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 62.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 40.7
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 45.4
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 55.4
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 62.5
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 65.9
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 52.1
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 59.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 52.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 42.9
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 42.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 39.8
GTEx sample id Sample description nTPM
30.435.942.717.361.00102030405060708090100
Colon - Sigmoid
Average nTPM: 37.3
Samples: 419

Max nTPM: 104.1
Min nTPM: 17.3
Std nTPM: 10.0
Median nTPM: 35.9
GTEX-ZYFD-2226-SM-5E43P 50-59 years, male 104.1
GTEX-1N2EF-1726-SM-EXUSI 60-69 years, male 81.2
GTEX-144GM-1126-SM-5O98M 20-29 years, male 74.1
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 72.4
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 72.0
GTEX-11UD2-2226-SM-GI4WZ 50-59 years, male 66.0
GTEX-1399S-1826-SM-GIN9Y 30-39 years, female 63.5
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 62.6
GTEX-14A5H-1626-SM-5MR7O 60-69 years, male 61.6
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 61.5
GTEX-1K9T9-2926-SM-E9TKD 50-59 years, female 61.0
Show allShow less
33.338.144.519.161.10102030405060708090100
Colon - Transverse
Average nTPM: 39.8
Samples: 479

Max nTPM: 100.3
Min nTPM: 19.1
Std nTPM: 10.8
Median nTPM: 38.1
GTEX-1IKOE-2026-SM-AHZ31 30-39 years, female 100.3
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 94.6
GTEX-144GM-1226-SM-5LU52 20-29 years, male 93.1
GTEX-14JIY-3326-SM-6871E 60-69 years, male 90.7
GTEX-1IOXB-2626-SM-CJI2N 50-59 years, male 82.9
GTEX-14PK6-1726-SM-6871J 70-79 years, female 75.4
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 71.6
GTEX-Q2AG-2026-SM-HAUY4 40-49 years, female 70.4
GTEX-1S5ZA-1526-SM-HLJR3 20-29 years, male 66.7
GTEX-ZYVF-2826-SM-5GIDK 50-59 years, female 66.5
GTEX-U8XE-2426-SM-GPRWM 30-39 years, male 65.8
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 64.9
FF:10014-101C5 62,83,84 years, mixed 64.9

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