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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
75.1
nTPM
HPA Brain:
26.0
nTPM
GTEx:
75.1
nTPM
FANTOM5:
38.1
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
26.0
Sample id
Sample description
nTPM
Amygdala nTPM: 24.4
2814
Male, age 76, right hemisphere
28.0
2517
Female, age 94, left hemisphere
25.9
2514
Male, age 75, right hemisphere
24.3
1987
Female, age 91, left hemisphere
22.2
2695
Female, age 67, right hemisphere
21.3
Basal amygdala nTPM: 23.4
2243
Female, age 91, right hemisphere
26.4
2685
Female, age 94, left hemisphere
25.4
2609
Male, age 75, right hemisphere
25.1
2110
Male, age 80, left hemisphere
23.7
1955
Male, age 76, both hemispheres
22.1
2827
Female, age 67, right hemisphere
17.8
Central amygdala nTPM: 26.0
2826
Female, age 94, left hemisphere
34.0
1905
Male, age 76, both hemispheres
30.1
2515
Male, age 75, right hemisphere
23.5
2239
Male, age 80, left hemisphere
21.2
2701
Female, age 91, right hemisphere
21.2
Corticomedial amygdala nTPM: 24.2
2428
Male, age 75, right hemisphere
31.0
2242
Female, age 91, right hemisphere
27.7
2429
Female, age 94, left hemisphere
26.5
2829
Male, age 80, left hemisphere
24.9
2240
Male, age 76, both hemispheres
19.3
2535
Female, age 67, right hemisphere
15.9
Lateral amygdala nTPM: 23.0
2516
Male, age 75, right hemisphere
31.2
1883
Male, age 76, both hemispheres
26.3
2534
Female, age 94, left hemisphere
24.3
2830
Female, age 67, right hemisphere
19.6
2255
Female, age 91, right hemisphere
19.1
2256
Male, age 80, left hemisphere
17.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
75.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 75.1
Samples: 152
Max nTPM: 232.8
Min nTPM: 26.3
Std nTPM: 25.9
Median nTPM: 69.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
232.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
194.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
164.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
152.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
131.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
129.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
122.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
122.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
119.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
117.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
113.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
108.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
107.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
104.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
102.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
96.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
95.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
94.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
94.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
93.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
93.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
91.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
89.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
89.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
89.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
88.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
87.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
87.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
86.0
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
85.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
85.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
85.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
84.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
84.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
84.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
83.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
82.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
82.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
82.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
82.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
82.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
81.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
80.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
79.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
79.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
79.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
79.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
78.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
77.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
77.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
77.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
77.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
77.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
76.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
76.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
76.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
76.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
75.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
75.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
75.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
74.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
74.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
74.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
74.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
72.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
71.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
71.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
71.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
71.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
71.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
70.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
70.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
70.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
70.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
70.3
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
69.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
69.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
69.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
68.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
68.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
68.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
68.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
68.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
68.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
68.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
68.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
67.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
67.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
67.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
67.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
67.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
66.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
66.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
66.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
66.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
65.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
65.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
64.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
64.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
64.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
64.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
64.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
64.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
63.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
63.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
63.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
63.1
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
62.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
62.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
62.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
61.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
61.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
61.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
60.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
60.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
59.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
59.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
58.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
58.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
58.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
58.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
57.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
57.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
57.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
57.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
57.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
57.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
56.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
56.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
56.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
54.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
54.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
54.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
54.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
53.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
53.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
52.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
51.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
50.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
50.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
49.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
49.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
48.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
46.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
46.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
46.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
39.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
39.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
39.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
26.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.