HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:31.3 nTPM
HPA Brain:33.6 nTPM
GTEx:31.3 nTPM
FANTOM5:42.9 Scaled Tags Per Million
Pig:40.1 nTPM
Mouse:62.1 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040919Antibody HPA041826
Glial cells Not detectedNot detected
Neuronal cells MediumLow



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 33.6
Sample id Sample description nTPM
Hippocampus
nTPM: 29.2
1898 Male, age 80, left hemisphere 36.7
1855 Male, age 76, left hemisphere 29.7
2529 Female, age 94, left hemisphere 27.8
2148 Female, age 91, left hemisphere 27.4
2621 Female, age 67, right hemisphere 27.2
1911 Female, age 85, right hemisphere 26.2
Dentate gyrus
nTPM: 29.3
2010 Male, age 76, both hemispheres 32.1
2528 Male, age 74, both hemispheres 30.7
2530 Female, age 94, left hemisphere 30.7
1927 Female, age 91, both hemispheres 29.6
2246 Female, age 85, both hemispheres 26.6
2531 Female, age 67, both hemispheres 26.3
Entorhinal gyrus
nTPM: 30.3
2764 Male, age 80, right hemisphere 36.0
1938 Female, age 85, left hemisphere 32.1
1787 Male, age 76, left hemisphere 30.8
2117 Female, age 91, right hemisphere 30.5
2613 Female, age 94, left hemisphere 29.4
2686 Male, age 75, right hemisphere 23.2
Hippocampus, CA1
nTPM: 31.5
2749 Male, age 80, left hemisphere 40.9
1873 Female, age 85, both hemispheres 31.3
2527 Male, age 74, both hemispheres 30.1
2082 Female, age 91, right hemisphere 28.2
2045 Male, age 76, both hemispheres 27.2
Hippocampus, CA2
nTPM: 30.9
1963 Male, age 80, left hemisphere 34.6
1892 Male, age 76, both hemispheres 34.4
2249 Male, age 74, both hemispheres 33.4
2437 Female, age 94, left hemisphere 28.6
1940 Female, age 85, left hemisphere 27.4
2113 Female, age 91, right hemisphere 27.0
Hippocampus, CA3
nTPM: 31.5
2137 Male, age 80, left hemisphere 37.3
1867 Male, age 76, both hemispheres 33.2
2436 Male, age 74, both hemispheres 32.4
2620 Female, age 94, left hemisphere 31.4
1891 Female, age 85, both hemispheres 30.0
2861 Female, age 67, both hemispheres 24.7
Parahippocampal cortex
nTPM: 29.3
1850 Male, age 80, both hemispheres 36.3
1990 Female, age 91, right hemisphere 32.1
2018 Male, age 76, both hemispheres 30.5
2532 Female, age 72, left hemisphere 29.9
1933 Female, age 85, both hemispheres 29.6
2245 Female, age 91, both hemispheres 28.9
2250 Female, age 67, right hemisphere 28.5
2693 Female, age 94, both hemispheres 27.4
2692 Male, age 74, both hemispheres 26.0
2622 Female, age 67, right hemisphere 23.4
Perirhinal gyrus
nTPM: 33.6
1794 Male, age 80, right hemisphere 37.6
1841 Female, age 85, right hemisphere 36.8
1847 Female, age 91, left hemisphere 36.8
2848 Male, age 76, right hemisphere 28.7
2521 Female, age 94, right hemisphere 27.9
Subiculum
nTPM: 30.0
1901 Male, age 80, both hemispheres 34.6
1977 Female, age 85, both hemispheres 33.8
2042 Male, age 76, both hemispheres 29.4
2619 Male, age 74, both hemispheres 28.2
2729 Female, age 91, right hemisphere 27.3
2438 Female, age 94, left hemisphere 26.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 31.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.3
Samples: 197

Max nTPM: 48.9
Min nTPM: 19.9
Std nTPM: 4.5
Median nTPM: 31.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 48.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 40.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 40.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 39.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 39.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 39.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 38.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 38.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 38.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 38.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.9
FF:10169-103B7 60 years, female 46.7
FF:10153-102I9 76 years, female 39.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 40.1
Pig sample Sample description nTPM
Subiculum
nTPM: 35.5
Samples: 4

Max nTPM: 45.0
Min nTPM: 30.5
Sample A Female 45.0
Sample B Female 33.8
Sample C Male 30.5
Sample D Male 32.8
Dorsal hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 49.7
Min nTPM: 32.2
Sample A Female 49.7
Sample B Female 41.2
Sample C Male 37.2
Sample D Male 32.2
Entorhinal cortex
nTPM: 33.8
Samples: 4

Max nTPM: 36.6
Min nTPM: 29.8
Sample A Female 36.6
Sample B Female 35.0
Sample C Male 33.7
Sample D Male 29.8
Ventral hippocampus
nTPM: 36.2
Samples: 4

Max nTPM: 41.2
Min nTPM: 27.2
Sample A Female 37.8
Sample B Female 27.2
Sample C Male 41.2
Sample D Male 38.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 62.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 65.0
Min nTPM: 49.9
Sample A Male 61.4
Sample B Male 64.1
Sample C Female 65.0
Sample D Female 49.9
Hippocampal formation
nTPM: 62.1
Samples: 4

Max nTPM: 67.0
Min nTPM: 57.5
Sample A Male 67.0
Sample B Male 57.5
Sample C Female 60.5
Sample D Female 63.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
76081912 Antisense, RP_060608_04_E02, Mouse strain C57BL/6J (56 days, male) 0.3

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