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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1.3
nTPM
HPA Brain:
16.2
nTPM
GTEx:
1.3
nTPM
FANTOM5:
12.0
Scaled Tags Per Million
Pig:
17.2
nTPM
SPINAL CORD - Annotated protein expression
Pending normal tissue analysis
SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
16.2
Sample id
Sample description
nTPM
Cervical spinal cord, central gray nTPM: 8.1
2194
Female, age 79, both hemispheres
8.8
2565
Male, age 75, midline
8.6
2048
Male, age 55, midline
7.9
1981
Female, age 72, midline
7.8
2816
Male, age 47, midline
7.3
Cervical spinal cord, dorsal horn nTPM: 16.2
2721
Male, age 90, both hemispheres
28.3
2297
Male, age 75, both hemispheres
24.1
1877
Male, age 55, unknown
17.9
2069
Male, age 47, both hemispheres
15.0
2173
Female, age 72, unknown
6.2
2296
Male, age 66, both hemispheres
5.7
Cervical spinal cord, ventral horn nTPM: 7.7
2068
Male, age 55, unknown
12.4
2295
Male, age 66, both hemispheres
9.5
2480
Male, age 75, both hemispheres
8.6
2820
Female, age 79, both hemispheres
7.4
2098
Female, age 72, unknown
4.7
2809
Male, age 90, both hemispheres
3.5
SPINAL CORD - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1.3
GTEx sample id
Sample description
nTPM
Brain - Spinal cord (cervical c-1) Average nTPM: 1.3
Samples: 159
Max nTPM: 11.3
Min nTPM: 0.0
Std nTPM: 1.5
Median nTPM: 0.9
GTEX-1GN73-0011-R9a-SM-CKZO5
60-69 years, male
11.3
GTEX-QVJO-0011-R9A-SM-2S1QH
60-69 years, female
10.2
GTEX-1LVAO-0011-R9a-SM-EZ6MY
60-69 years, male
8.1
GTEX-13OVJ-0011-R9b-SM-5L3GD
50-59 years, female
6.7
GTEX-R55E-0011-R9A-SM-2TC6C
20-29 years, male
4.6
GTEX-15DDE-0011-R9b-SM-6M46U
50-59 years, female
4.0
GTEX-NPJ8-0011-R9a-SM-2YUN5
40-49 years, male
4.0
GTEX-12WSD-0011-R9a-SM-5GU6W
60-69 years, female
3.9
GTEX-1LVA9-0011-R9a-SM-EYYWF
50-59 years, male
3.5
GTEX-YFC4-0011-R9a-SM-4SOK4
40-49 years, female
3.4
GTEX-TSE9-0011-R9A-SM-3DB7Q
60-69 years, female
3.1
GTEX-11GSP-0011-R9b-SM-5NQ77
60-69 years, female
3.0
GTEX-1HFI6-0011-R9b-SM-CMKH4
40-49 years, male
2.9
GTEX-11ZUS-0011-R9b-SM-5BC76
30-39 years, male
2.8
GTEX-13X6I-0011-R9b-SM-5PNZJ
60-69 years, male
2.7
GTEX-14JIY-0011-R9a-SM-6EU34
60-69 years, male
2.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI
60-69 years, male
2.7
GTEX-13SLW-0011-R9a-SM-5O9BT
70-79 years, male
2.5
GTEX-14BIM-0011-R9a-SM-6LLJL
60-69 years, female
2.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO
70-79 years, male
2.4
GTEX-ZVZQ-0011-R9a-SM-51MRH
60-69 years, female
2.2
GTEX-13JUV-0011-R9a-SM-5LZX3
40-49 years, female
2.1
GTEX-14BMV-0011-R9b-SM-5ZZUA
50-59 years, male
2.1
GTEX-131YS-0011-R9b-SM-5EQLY
60-69 years, female
2.0
GTEX-11ZTS-0011-R9b-SM-DO93Q
60-69 years, female
2.0
GTEX-1JJ6O-0011-R9a-SM-EYYXP
60-69 years, male
2.0
GTEX-1192X-0011-R9b-SM-DO934
50-59 years, male
1.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8
50-59 years, male
1.9
GTEX-13NYB-0011-R9b-SM-5MR5P
40-49 years, male
1.8
GTEX-13PL6-0011-R9b-SM-5O9CH
40-49 years, female
1.8
GTEX-ZAB4-0011-R9a-SM-4SOKG
40-49 years, male
1.8
GTEX-1HR98-0011-R9b-SM-ARL79
60-69 years, male
1.8
GTEX-13NYS-0011-R9b-SM-5MR44
60-69 years, male
1.7
GTEX-RNOR-0011-R9A-SM-2TF52
50-59 years, female
1.7
GTEX-1EKGG-0011-R9a-SM-CMKFV
60-69 years, male
1.7
GTEX-1IGQW-0011-R9b-SM-D4P25
60-69 years, male
1.6
GTEX-1J8EW-0011-R9b-SM-D4P2F
60-69 years, female
1.6
GTEX-12126-0011-R9b-SM-5BC6P
20-29 years, male
1.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK
40-49 years, female
1.5
GTEX-15DYW-0011-R9b-SM-6PALB
60-69 years, female
1.4
GTEX-15EO6-0011-R9a-SM-6PALG
50-59 years, male
1.4
GTEX-1B933-0011-R9a-SM-79OOR
50-59 years, female
1.4
GTEX-11DZ1-0011-R9a-SM-DO933
50-59 years, male
1.4
GTEX-1GZHY-0011-R9a-SM-9WG5R
50-59 years, female
1.4
GTEX-1HGF4-0011-R9a-SM-ADEH9
60-69 years, male
1.4
GTEX-1I1GV-0011-R9b-SM-ARZLE
60-69 years, male
1.4
GTEX-1OJC4-0011-R9a-SM-EZ6N1
50-59 years, female
1.4
GTEX-12WSC-0011-R9a-SM-5GU4U
50-59 years, male
1.3
GTEX-NL4W-0011-R9a-SM-2I3G1
50-59 years, male
1.3
GTEX-1I19N-0011-R9a-SM-CMKHN
70-79 years, male
1.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR
60-69 years, female
1.3
GTEX-11ONC-0011-R9b-SM-5NQ8J
60-69 years, male
1.2
GTEX-13SLX-0011-R9b-SM-5SI6X
50-59 years, female
1.2
GTEX-13VXU-0011-R9b-SM-5SI73
50-59 years, male
1.2
GTEX-11WQK-0011-R9b-SM-5BC6N
50-59 years, male
1.1
GTEX-13N2G-0011-R9b-SM-5MR4E
60-69 years, male
1.1
GTEX-16NPV-0011-R9b-SM-79ONF
50-59 years, female
1.1
GTEX-1H1DG-0011-R9b-SM-ACKVB
70-79 years, male
1.1
GTEX-1ICLZ-0011-R9a-SM-ARL7E
60-69 years, male
1.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ
50-59 years, male
1.1
GTEX-13CIG-0011-R9a-SM-5K7VU
50-59 years, male
1.0
GTEX-13OW5-0011-R9b-SM-5O9CL
60-69 years, male
1.0
GTEX-13RTJ-0011-R9a-SM-5Q5AY
60-69 years, male
1.0
GTEX-14E7W-0011-R9a-SM-62LE6
70-79 years, male
1.0
GTEX-11EMC-0011-R9b-SM-DO921
60-69 years, female
1.0
GTEX-1GF9V-0011-R9a-SM-CL53K
60-69 years, male
1.0
GTEX-1H3NZ-0011-R9a-SM-ADEH7
60-69 years, male
1.0
GTEX-1HBPI-0011-R9b-SM-ARL76
50-59 years, male
1.0
GTEX-1I1CD-0011-R9a-SM-CMKHB
60-69 years, female
1.0
GTEX-1I1HK-0011-R9a-SM-CMKHK
60-69 years, male
1.0
GTEX-1JMLX-0011-R9a-SM-EYYXM
50-59 years, male
1.0
GTEX-1LSNL-0011-R9b-SM-EYYWK
50-59 years, male
1.0
GTEX-1RQEC-0011-R9a-SM-EZ6N3
60-69 years, male
1.0
GTEX-13NZA-0011-R9b-SM-5MR5I
60-69 years, male
0.9
GTEX-13OVL-0011-R9a-SM-5P9GX
50-59 years, male
0.9
GTEX-145LU-0011-R9b-SM-5SI66
50-59 years, male
0.9
GTEX-147GR-0011-R9a-SM-5S2UY
60-69 years, male
0.9
GTEX-15CHQ-0011-R9a-SM-6LLHX
60-69 years, male
0.9
GTEX-QVUS-0011-R9A-SM-3GIJA
60-69 years, female
0.9
GTEX-XLM4-0011-R9A-SM-4AT45
60-69 years, male
0.9
GTEX-1F6I4-0011-R9a-SM-CMKFU
60-69 years, male
0.9
GTEX-1H2FU-0011-R9b-SM-CE6S4
60-69 years, female
0.9
GTEX-11ZVC-0011-R9a-SM-57WC5
50-59 years, female
0.8
GTEX-13FLV-0011-R9b-SM-5L3DA
50-59 years, male
0.8
GTEX-14PJM-0011-R9b-SM-6EU35
50-59 years, female
0.8
GTEX-15ER7-0011-R9b-SM-6PALF
20-29 years, female
0.8
GTEX-T6MN-0011-R9A-SM-32QOZ
50-59 years, male
0.8
GTEX-1B8L1-0011-R9b-SM-9WG5U
60-69 years, male
0.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A
40-49 years, male
0.8
GTEX-1IDJH-0011-R9a-SM-ADEIN
70-79 years, male
0.8
GTEX-1LB8K-0011-R9a-SM-EZ6MP
50-59 years, male
0.8
GTEX-QDT8-0011-R9A-SM-CYPRD
30-39 years, female
0.8
GTEX-12WSH-0011-R9b-SM-5LZUG
50-59 years, male
0.7
GTEX-13FXS-0011-R9a-SM-5K7UI
50-59 years, male
0.7
GTEX-13QJC-0011-R9b-SM-5PNX3
60-69 years, female
0.7
GTEX-17EVQ-0011-R9b-SM-79OJY
70-79 years, male
0.7
GTEX-RU72-0011-R9A-SM-2TF67
50-59 years, female
0.7
GTEX-YJ89-0011-R9a-SM-4SOK7
60-69 years, male
0.7
GTEX-1EU9M-0011-R9a-SM-9WG61
60-69 years, male
0.7
GTEX-1F52S-0011-R9a-SM-9WG62
60-69 years, female
0.7
GTEX-1H3O1-0011-R9b-SM-CM2SQ
60-69 years, male
0.7
GTEX-PWO3-0011-R9A-SM-EVR2V
60-69 years, female
0.7
GTEX-13O1R-0011-R9b-SM-5KM33
60-69 years, male
0.6
GTEX-14PN4-0011-R9a-SM-6LLH9
50-59 years, male
0.6
GTEX-NPJ7-0011-R9a-SM-2TC5R
60-69 years, female
0.6
GTEX-OXRO-0011-R9A-SM-3NB1X
60-69 years, female
0.6
GTEX-1GN2E-0011-R9b-SM-9WG7F
60-69 years, male
0.6
GTEX-1HSMO-0011-R9b-SM-CM2T2
60-69 years, male
0.6
GTEX-1IY9M-0011-R9b-SM-D3L8J
60-69 years, male
0.6
GTEX-1J8JJ-0011-R9a-SM-ACKVF
60-69 years, female
0.6
GTEX-1R46S-0011-R9a-SM-EZ6N7
60-69 years, female
0.6
GTEX-13FTY-0011-R9b-SM-5KM2U
40-49 years, female
0.5
GTEX-14BIN-0011-R9a-SM-5SI76
50-59 years, female
0.5
GTEX-14PJO-0011-R9b-SM-62LE9
60-69 years, male
0.5
GTEX-15DCD-0011-R9b-SM-7KUED
70-79 years, female
0.5
GTEX-16XZZ-0011-R9b-SM-7DHKX
60-69 years, male
0.5
GTEX-16Z82-0011-R9a-SM-7DUFA
60-69 years, male
0.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6
40-49 years, female
0.5
GTEX-1CAMQ-0011-R9a-SM-9WG5Z
40-49 years, male
0.5
GTEX-1CB4H-0011-R9a-SM-CKZNL
60-69 years, female
0.5
GTEX-1GN1U-0011-R9b-SM-CMKFW
50-59 years, female
0.5
GTEX-1H1DF-0011-R9b-SM-CM2RN
40-49 years, female
0.5
GTEX-1I1GS-0011-R9b-SM-CMKHF
60-69 years, male
0.5
GTEX-1KANB-0011-R9b-SM-EZ6MO
50-59 years, male
0.5
GTEX-131XW-0011-R9a-SM-5N9EO
50-59 years, female
0.4
GTEX-13N1W-0011-R9b-SM-5MR4R
70-79 years, male
0.4
GTEX-13PVQ-0011-R9b-SM-5LU3B
50-59 years, male
0.4
GTEX-13S7M-0011-R9a-SM-5O9DW
60-69 years, female
0.4
GTEX-14ABY-0011-R9a-SM-5PNZK
50-59 years, male
0.4
GTEX-18464-0011-R9a-SM-731BK
50-59 years, male
0.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ
70-79 years, male
0.4
GTEX-T5JC-0011-R9A-SM-32PLV
20-29 years, male
0.4
GTEX-ZE9C-0011-R9a-SM-4WWCY
60-69 years, male
0.4
GTEX-ZF28-0011-R9a-SM-4WWDY
60-69 years, male
0.4
GTEX-1C6VS-0011-R9b-SM-9WG5W
60-69 years, male
0.4
GTEX-1CAV2-0011-R9b-SM-9WG5M
40-49 years, female
0.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L
70-79 years, female
0.4
GTEX-1GF9W-0011-R9b-SM-9WG7J
60-69 years, male
0.4
GTEX-1HBPH-0011-R9a-SM-CMKH3
40-49 years, female
0.4
GTEX-13CZV-0011-R9a-SM-5LZXT
60-69 years, male
0.3
GTEX-14BIL-0011-R9a-SM-5SI7A
50-59 years, male
0.3
GTEX-15G19-0011-R9b-SM-7KUEE
60-69 years, male
0.3
GTEX-1A8G7-0011-R9b-SM-7IGQH
60-69 years, male
0.3
GTEX-OHPN-0011-R9A-SM-5TDEJ
60-69 years, female
0.3
GTEX-WL46-0011-R9A-SM-3MJFP
50-59 years, male
0.3
GTEX-XMD1-0011-R9A-SM-4AT49
60-69 years, male
0.3
GTEX-1C6VQ-0011-R9a-SM-7SB85
50-59 years, male
0.3
GTEX-1EH9U-0011-R9b-SM-9WG5T
60-69 years, male
0.3
GTEX-1F88F-0011-R9b-SM-9WG7L
60-69 years, female
0.3
GTEX-1H23P-0011-R9a-SM-CM2T1
60-69 years, male
0.3
GTEX-139T4-0011-R9b-SM-5HL6S
50-59 years, female
0.2
GTEX-13PLJ-0011-R9b-SM-5O9DV
60-69 years, female
0.2
GTEX-148VJ-0011-R9b-SM-5SI77
70-79 years, male
0.2
GTEX-14E6C-0011-R9a-SM-6EU33
40-49 years, male
0.2
GTEX-11UD2-0011-R9b-SM-DO926
50-59 years, male
0.2
GTEX-1A32A-0011-R9b-SM-7MGXD
50-59 years, female
0.2
GTEX-1GTWX-0011-R9a-SM-ADEH4
60-69 years, male
0.2
GTEX-1HBPM-0011-R9b-SM-ARL7C
60-69 years, female
0.1
GTEX-139UW-0011-R9b-SM-5LZYT
60-69 years, male
0.0
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SPINAL CORD - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
