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  • SUMMARY

  • TISSUE

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  • BEX4
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:283.7 nTPM
HPA Brain:175.0 nTPM
GTEx:283.7 nTPM
Pig:137.9 nTPM
Mouse:65.4 nTPM
Allen mouse:5.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

175.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 175.0
2226 Male, age 75, left hemisphere 221.4
1961 Female, age 42, unknown 128.6
Dorsomedial nucleus
nTPM: 108.3
2041 Female, age 72, unknown 120.7
1989 Male, age 62, unknown 103.8
2017 Female, age 42, unknown 100.4
Lateral hypothalamic area
nTPM: 161.1
2228 Male, age 66, unknown 245.4
2271 Male, age 75, both hemispheres 155.0
1791 Male, age 80, right hemisphere 142.7
2412 Male, age 62, unknown 101.4
Mammillary body
nTPM: 109.2
1923 Female, age 72, unknown 138.1
1948 Female, age 72, unknown 110.4
1945 Male, age 80, right hemisphere 107.9
2413 Male, age 66, unknown 96.6
1834 Female, age 42, unknown 92.8
Paraventricular nucleus
nTPM: 142.2
2700 Male, age 62, unknown 142.2
Preoptic area
nTPM: 132.4
1907 Male, age 80, right hemisphere 169.0
2414 Female, age 72, unknown 117.8
1861 Female, age 42, unknown 110.3
Supraoptic nucleus
nTPM: 117.5
1894 Female, age 72, unknown 135.2
2835 Female, age 72, unknown 113.4
2043 Male, age 62, unknown 103.8
Ventromedial nucleus
nTPM: 143.4
1982 Female, age 72, unknown 158.3
1822 Female, age 42, unknown 128.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 283.7
Samples: 257

Max nTPM: 486.9
Min nTPM: 113.7
Std nTPM: 68.1
Median nTPM: 285.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 486.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 467.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 448.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 415.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 412.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 407.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 407.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 405.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 404.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 402.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 402.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 395.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 393.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 390.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 389.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 381.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 380.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 379.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 378.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 377.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 376.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 376.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 376.0
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 374.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 373.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 371.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 366.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 365.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 364.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 364.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 363.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 363.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 362.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 361.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 358.8
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 358.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 357.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 355.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 355.7
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 355.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 355.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 354.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 353.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 351.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 351.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 349.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 348.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 348.5
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 348.4
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 347.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 346.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 345.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 344.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 343.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 343.1
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 342.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 342.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 342.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 341.9
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 339.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 339.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 339.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 337.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 336.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 335.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 335.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 333.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 333.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 332.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 329.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 329.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 326.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 325.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 322.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 320.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 320.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 320.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 319.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 318.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 318.5
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 317.8
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 316.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 313.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 312.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 312.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 312.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 312.2
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 312.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 311.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 309.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 309.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 308.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 307.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 307.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 306.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 306.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 306.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 305.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 304.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 304.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 304.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 303.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 303.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 303.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 302.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 302.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 301.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 301.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 301.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 300.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 299.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 297.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 297.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 297.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 296.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 296.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 296.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 293.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 291.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 291.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 291.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 290.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 289.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 288.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 287.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 286.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 286.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 285.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 285.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 284.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 281.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 280.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 280.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 279.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 279.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 278.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 278.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 278.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 278.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 278.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 277.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 277.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 277.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 277.5
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 276.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 275.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 274.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 273.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 273.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 272.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 272.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 271.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 271.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 268.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 267.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 267.3
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 263.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 262.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 262.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 262.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 262.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 262.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 260.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 260.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 260.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 259.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 257.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 256.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 255.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 255.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 254.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 254.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 254.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 253.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 252.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 250.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 249.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 249.8
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 249.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 247.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 247.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 246.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 246.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 245.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 244.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 242.4
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 237.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 237.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 237.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 237.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 236.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 233.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 233.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 233.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 231.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 231.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 230.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 230.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 229.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 228.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 228.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 223.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 220.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 219.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 218.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 217.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 217.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 217.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 216.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 216.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 215.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 214.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 213.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 211.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 211.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 211.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 208.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 207.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 206.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 206.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 202.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 202.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 202.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 201.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 201.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 200.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 199.2
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 198.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 197.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 196.0
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 195.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 193.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 192.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 191.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 184.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 181.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 180.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 177.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 177.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 177.3
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 176.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 173.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 173.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 172.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 170.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 169.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 168.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 167.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 165.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 161.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 156.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 151.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 146.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 143.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 140.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 126.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 113.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

137.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 137.9
Samples: 4

Max nTPM: 160.3
Min nTPM: 126.1
Sample A Female 160.3
Sample B Female 127.4
Sample C Male 137.9
Sample D Male 126.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.4
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 65.4
Samples: 4

Max nTPM: 73.2
Min nTPM: 54.6
Sample A Male 73.2
Sample B Male 71.7
Sample C Female 62.2
Sample D Female 54.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.1
69201534 Antisense, RP_050317_03_B02, Mouse strain C57BL/6J (56 days, male) 5.1

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