HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:220.4 nTPM
HPA Brain:129.3 nTPM
GTEx:220.4 nTPM
FANTOM5:607.3 Scaled Tags Per Million
Pig:116.2 nTPM
Mouse:37.0 nTPM
Allen mouse:3.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045105
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 129.3
Sample id Sample description nTPM
Hippocampus
nTPM: 101.1
1898 Male, age 80, left hemisphere 121.9
1855 Male, age 76, left hemisphere 110.1
2621 Female, age 67, right hemisphere 102.7
1911 Female, age 85, right hemisphere 94.9
2529 Female, age 94, left hemisphere 92.4
2148 Female, age 91, left hemisphere 84.9
Dentate gyrus
nTPM: 103.1
1927 Female, age 91, both hemispheres 123.3
2246 Female, age 85, both hemispheres 110.1
2530 Female, age 94, left hemisphere 109.2
2010 Male, age 76, both hemispheres 102.2
2531 Female, age 67, both hemispheres 92.9
2528 Male, age 74, both hemispheres 81.1
Entorhinal gyrus
nTPM: 104.3
1938 Female, age 85, left hemisphere 130.6
1787 Male, age 76, left hemisphere 106.6
2613 Female, age 94, left hemisphere 105.0
2764 Male, age 80, right hemisphere 100.6
2117 Female, age 91, right hemisphere 94.4
2686 Male, age 75, right hemisphere 88.5
Hippocampus, CA1
nTPM: 112.6
2749 Male, age 80, left hemisphere 158.6
1873 Female, age 85, both hemispheres 118.5
2527 Male, age 74, both hemispheres 107.5
2045 Male, age 76, both hemispheres 99.1
2082 Female, age 91, right hemisphere 79.3
Hippocampus, CA2
nTPM: 103.4
1892 Male, age 76, both hemispheres 145.0
1963 Male, age 80, left hemisphere 111.2
2437 Female, age 94, left hemisphere 98.5
1940 Female, age 85, left hemisphere 95.2
2249 Male, age 74, both hemispheres 92.6
2113 Female, age 91, right hemisphere 77.8
Hippocampus, CA3
nTPM: 103.5
2137 Male, age 80, left hemisphere 135.5
1867 Male, age 76, both hemispheres 115.5
1891 Female, age 85, both hemispheres 103.4
2436 Male, age 74, both hemispheres 97.6
2620 Female, age 94, left hemisphere 89.5
2861 Female, age 67, both hemispheres 79.2
Parahippocampal cortex
nTPM: 108.2
2245 Female, age 91, both hemispheres 134.7
1850 Male, age 80, both hemispheres 134.2
1933 Female, age 85, both hemispheres 126.4
2532 Female, age 72, left hemisphere 118.0
1990 Female, age 91, right hemisphere 111.2
2250 Female, age 67, right hemisphere 111.1
2693 Female, age 94, both hemispheres 100.1
2018 Male, age 76, both hemispheres 92.3
2692 Male, age 74, both hemispheres 83.2
2622 Female, age 67, right hemisphere 70.5
Perirhinal gyrus
nTPM: 129.3
1841 Female, age 85, right hemisphere 140.2
2521 Female, age 94, right hemisphere 132.6
1847 Female, age 91, left hemisphere 130.9
1794 Male, age 80, right hemisphere 127.6
2848 Male, age 76, right hemisphere 115.1
Subiculum
nTPM: 102.0
2438 Female, age 94, left hemisphere 135.7
1977 Female, age 85, both hemispheres 118.0
1901 Male, age 80, both hemispheres 117.1
2042 Male, age 76, both hemispheres 90.8
2619 Male, age 74, both hemispheres 84.5
2729 Female, age 91, right hemisphere 65.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 220.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 220.4
Samples: 255

Max nTPM: 436.4
Min nTPM: 80.7
Std nTPM: 63.6
Median nTPM: 217.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 436.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 393.7
GTEX-1N2EF-0011-R1a-SM-F2TAT 60-69 years, male 362.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 360.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 357.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 354.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 350.6
GTEX-13SLX-0011-R1a-SM-H6Q8N 50-59 years, female 343.5
GTEX-11ZUS-0011-R1a-SM-GI4W7 30-39 years, male 343.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 337.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 336.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 607.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 607.3
FF:10169-103B7 60 years, female 835.0
FF:10153-102I9 76 years, female 379.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 116.2
Pig sample Sample description nTPM
Subiculum
nTPM: 112.2
Samples: 4

Max nTPM: 139.5
Min nTPM: 90.8
Sample A Female 139.5
Sample B Female 109.9
Sample C Male 108.5
Sample D Male 90.8
Dorsal hippocampus
nTPM: 114.2
Samples: 4

Max nTPM: 134.1
Min nTPM: 95.1
Sample A Female 134.1
Sample B Female 107.0
Sample C Male 120.5
Sample D Male 95.1
Entorhinal cortex
nTPM: 103.4
Samples: 4

Max nTPM: 116.4
Min nTPM: 96.7
Sample A Female 98.7
Sample B Female 116.4
Sample C Male 101.9
Sample D Male 96.7
Ventral hippocampus
nTPM: 116.2
Samples: 4

Max nTPM: 139.2
Min nTPM: 94.1
Sample A Female 114.9
Sample B Female 94.1
Sample C Male 139.2
Sample D Male 116.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 37.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 37.0
Samples: 4

Max nTPM: 41.3
Min nTPM: 30.7
Sample A Male 30.7
Sample B Male 38.0
Sample C Female 38.0
Sample D Female 41.3
Hippocampal formation
nTPM: 32.6
Samples: 4

Max nTPM: 39.9
Min nTPM: 25.5
Sample A Male 39.9
Sample B Male 29.5
Sample C Female 25.5
Sample D Female 35.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
69201534 Antisense, RP_050317_03_B02, Mouse strain C57BL/6J (56 days, male) 3.8

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