HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.2 nTPM
HPA Brain:34.1 nTPM
GTEx:10.2 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:14.4 nTPM
Allen mouse:4.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011900
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 34.1
Sample id Sample description nTPM
Hippocampus
nTPM: 31.6
1898 Male, age 80, left hemisphere 36.8
1855 Male, age 76, left hemisphere 34.9
2621 Female, age 67, right hemisphere 32.6
1911 Female, age 85, right hemisphere 30.7
2148 Female, age 91, left hemisphere 30.4
2529 Female, age 94, left hemisphere 24.1
Dentate gyrus
nTPM: 30.3
2010 Male, age 76, both hemispheres 33.0
2246 Female, age 85, both hemispheres 32.5
2531 Female, age 67, both hemispheres 30.3
2530 Female, age 94, left hemisphere 29.0
1927 Female, age 91, both hemispheres 28.9
2528 Male, age 74, both hemispheres 28.3
Entorhinal gyrus
nTPM: 29.2
2613 Female, age 94, left hemisphere 34.7
2764 Male, age 80, right hemisphere 31.4
1938 Female, age 85, left hemisphere 29.2
1787 Male, age 76, left hemisphere 27.3
2686 Male, age 75, right hemisphere 26.9
2117 Female, age 91, right hemisphere 25.5
Hippocampus, CA1
nTPM: 34.1
2749 Male, age 80, left hemisphere 46.8
1873 Female, age 85, both hemispheres 34.8
2527 Male, age 74, both hemispheres 32.8
2045 Male, age 76, both hemispheres 29.9
2082 Female, age 91, right hemisphere 26.4
Hippocampus, CA2
nTPM: 30.4
1963 Male, age 80, left hemisphere 39.7
1892 Male, age 76, both hemispheres 32.6
1940 Female, age 85, left hemisphere 28.2
2113 Female, age 91, right hemisphere 27.9
2437 Female, age 94, left hemisphere 27.3
2249 Male, age 74, both hemispheres 26.5
Hippocampus, CA3
nTPM: 31.4
2137 Male, age 80, left hemisphere 43.0
2861 Female, age 67, both hemispheres 35.8
2620 Female, age 94, left hemisphere 29.5
1867 Male, age 76, both hemispheres 27.4
1891 Female, age 85, both hemispheres 26.8
2436 Male, age 74, both hemispheres 25.9
Parahippocampal cortex
nTPM: 30.5
2693 Female, age 94, both hemispheres 33.8
1933 Female, age 85, both hemispheres 32.9
2532 Female, age 72, left hemisphere 32.2
2250 Female, age 67, right hemisphere 31.7
2245 Female, age 91, both hemispheres 31.3
2622 Female, age 67, right hemisphere 30.2
1850 Male, age 80, both hemispheres 30.1
2018 Male, age 76, both hemispheres 29.2
1990 Female, age 91, right hemisphere 26.8
2692 Male, age 74, both hemispheres 26.5
Perirhinal gyrus
nTPM: 33.7
2521 Female, age 94, right hemisphere 38.4
1841 Female, age 85, right hemisphere 35.1
1847 Female, age 91, left hemisphere 34.3
1794 Male, age 80, right hemisphere 32.3
2848 Male, age 76, right hemisphere 28.4
Subiculum
nTPM: 26.5
1977 Female, age 85, both hemispheres 29.6
1901 Male, age 80, both hemispheres 28.2
2729 Female, age 91, right hemisphere 28.2
2619 Male, age 74, both hemispheres 26.1
2042 Male, age 76, both hemispheres 23.5
2438 Female, age 94, left hemisphere 23.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.2
Samples: 197

Max nTPM: 21.8
Min nTPM: 4.1
Std nTPM: 3.1
Median nTPM: 9.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 18.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 17.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 16.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 16.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 16.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 16.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 15.9
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 15.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 15.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10153-102I9 76 years, female 29.0
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.7
Pig sample Sample description nTPM
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.2
Sample A Female 14.8
Sample B Female 14.1
Sample C Male 15.1
Sample D Male 13.2
Dorsal hippocampus
nTPM: 14.7
Samples: 4

Max nTPM: 15.1
Min nTPM: 13.4
Sample A Female 15.1
Sample B Female 15.1
Sample C Male 13.4
Sample D Male 15.1
Entorhinal cortex
nTPM: 14.5
Samples: 4

Max nTPM: 15.4
Min nTPM: 12.9
Sample A Female 15.0
Sample B Female 12.9
Sample C Male 15.4
Sample D Male 14.8
Ventral hippocampus
nTPM: 14.3
Samples: 4

Max nTPM: 15.5
Min nTPM: 12.4
Sample A Female 13.7
Sample B Female 12.4
Sample C Male 15.5
Sample D Male 15.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 16.0
Min nTPM: 12.4
Sample A Male 14.5
Sample B Male 14.8
Sample C Female 12.4
Sample D Female 16.0
Hippocampal formation
nTPM: 12.5
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.3
Sample A Male 12.1
Sample B Male 14.1
Sample C Female 13.6
Sample D Female 10.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.8
71570741 Antisense, RP_050510_04_F11, Mouse strain C57BL/6J (56 days, male) 4.8

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