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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
89.7
nTPM
HPA Brain:
110.2
nTPM
GTEx:
89.7
nTPM
FANTOM5:
100.4
Scaled Tags Per Million
Pig:
114.5
nTPM
Mouse:
71.3
nTPM
Allen mouse:
6.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
110.2
Sample id
Sample description
nTPM
Amygdala nTPM: 110.2
1987
Female, age 91, left hemisphere
156.3
2517
Female, age 94, left hemisphere
117.9
2695
Female, age 67, right hemisphere
103.9
2514
Male, age 75, right hemisphere
97.3
2814
Male, age 76, right hemisphere
75.8
Basal amygdala nTPM: 69.8
2609
Male, age 75, right hemisphere
89.1
2110
Male, age 80, left hemisphere
82.9
2243
Female, age 91, right hemisphere
80.0
1955
Male, age 76, both hemispheres
70.8
2685
Female, age 94, left hemisphere
58.3
2827
Female, age 67, right hemisphere
37.9
Central amygdala nTPM: 82.3
2515
Male, age 75, right hemisphere
107.1
2701
Female, age 91, right hemisphere
83.6
2826
Female, age 94, left hemisphere
77.0
2239
Male, age 80, left hemisphere
72.4
1905
Male, age 76, both hemispheres
71.6
Corticomedial amygdala nTPM: 72.0
2428
Male, age 75, right hemisphere
93.5
2242
Female, age 91, right hemisphere
92.4
2829
Male, age 80, left hemisphere
81.0
2240
Male, age 76, both hemispheres
66.2
2429
Female, age 94, left hemisphere
57.9
2535
Female, age 67, right hemisphere
41.2
Lateral amygdala nTPM: 66.3
2255
Female, age 91, right hemisphere
81.8
2256
Male, age 80, left hemisphere
80.0
2516
Male, age 75, right hemisphere
70.2
1883
Male, age 76, both hemispheres
63.6
2534
Female, age 94, left hemisphere
59.6
2830
Female, age 67, right hemisphere
42.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
89.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 89.7
Samples: 152
Max nTPM: 338.1
Min nTPM: 13.8
Std nTPM: 43.3
Median nTPM: 80.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
338.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
194.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
183.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
182.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
180.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
177.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
173.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
170.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
164.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
164.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
164.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
154.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
153.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
152.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
151.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
150.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
150.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
144.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
141.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
139.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
136.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
134.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
134.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
133.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
128.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
128.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
125.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
123.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
123.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
122.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
121.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
120.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
119.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
116.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
116.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
114.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
112.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
109.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
107.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
107.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
106.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
106.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
104.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
103.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
102.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
101.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
101.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
101.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
101.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
100.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
97.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
95.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
94.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
94.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
93.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
93.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
91.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
91.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
89.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
88.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
87.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
87.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
86.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
86.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
86.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
85.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
84.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
84.8
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
84.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
83.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
82.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
82.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
82.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
81.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
81.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
81.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
80.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
78.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
78.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
78.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
77.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
77.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
77.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
76.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
76.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
75.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
75.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
75.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
75.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
74.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
74.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
73.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
73.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
73.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
71.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
71.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
71.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
70.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
70.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
69.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
69.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
69.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
69.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
68.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
68.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
67.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
67.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
67.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
66.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
66.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
66.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
65.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
62.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
61.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
61.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
61.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
61.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
60.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
60.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
59.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
59.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
57.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
56.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
54.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
53.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
53.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
53.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
52.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
52.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
50.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
50.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
49.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
48.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
48.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
48.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
47.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
45.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
43.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
42.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
42.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
41.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
37.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
36.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
33.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
32.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
31.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
30.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
26.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
25.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
24.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
22.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
13.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
71.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 71.3
Samples: 4
Max nTPM: 79.8
Min nTPM: 66.8
Sample A
Male
66.8
Sample B
Male
66.9
Sample C
Female
79.8
Sample D
Female
71.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.