We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
103.1
nTPM
FANTOM5:
135.5
Scaled Tags Per Million
Pig:
73.8
nTPM
Allen mouse:
2.0
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
103.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 76.3
2090
Male, age 80, both hemispheres
86.2
2188
Female, age 91, both hemispheres
76.4
1984
Male, age 76, both hemispheres
72.1
2301
Female, age 85, both hemispheres
70.5
Dorsal cochlear nucleus nTPM: 88.6
2187
Female, age 91, both hemispheres
95.8
2058
Male, age 76, both hemispheres
92.0
2802
Male, age 74, right hemisphere
89.8
2378
Male, age 80, both hemispheres
83.0
2370
Male, age 61, both hemispheres
82.3
Dorsal tegmental nucleus nTPM: 86.4
2083
Male, age 80, both hemispheres
99.1
2326
Male, age 74, both hemispheres
94.5
1936
Male, age 76, left hemisphere
82.4
2358
Male, age 61, both hemispheres
69.4
Dorsolateral tegmental area nTPM: 85.3
2654
Male, age 80, both hemispheres
98.3
2751
Female, age 85, both hemispheres
98.3
2360
Male, age 74, both hemispheres
90.9
2141
Male, age 76, both hemispheres
78.1
2337
Male, age 61, both hemispheres
61.1
Kolliker-Fuse nucleus nTPM: 87.3
2315
Male, age 76, right hemisphere
97.4
2163
Male, age 80, both hemispheres
97.2
2793
Female, age 91, left hemisphere
67.3
Lateral lemniscal nuclei nTPM: 79.5
2169
Male, age 76, both hemispheres
89.5
2746
Female, age 85, left hemisphere
81.8
2453
Male, age 74, right hemisphere
81.3
2036
Male, age 80, both hemispheres
80.1
2320
Female, age 91, left hemisphere
64.9
Lateral parabrachial nucleus nTPM: 83.3
2139
Female, age 85, right hemisphere
96.2
2013
Male, age 80, both hemispheres
89.9
2790
Male, age 61, both hemispheres
77.6
2792
Male, age 76, both hemispheres
69.4
Lateral vestibular nucleus nTPM: 84.4
2184
Male, age 76, both hemispheres
86.3
2311
Male, age 80, both hemispheres
82.4
Locus coeruleus nTPM: 103.1
2123
Female, age 91, both hemispheres
125.9
2014
Male, age 55, unknown
121.0
2788
Male, age 74, unknown
120.9
2317
Female, age 72, unknown
93.1
1980
Male, age 76, both hemispheres
92.7
2720
Male, age 74, both hemispheres
85.0
2162
Male, age 80, both hemispheres
82.8
Medial parabrachial nucleus nTPM: 85.6
2854
Male, age 80, both hemispheres
89.6
2170
Female, age 91, both hemispheres
88.8
2156
Male, age 61, both hemispheres
84.5
2786
Male, age 76, both hemispheres
83.0
2463
Female, age 85, right hemisphere
82.2
Medial periolivary nuclei nTPM: 86.3
2063
Male, age 76, both hemispheres
97.8
2791
Male, age 74, right hemisphere
94.9
2171
Female, age 85, both hemispheres
92.3
2081
Male, age 80, both hemispheres
80.4
2458
Female, age 91, both hemispheres
66.4
Motor facial nucleus nTPM: 80.2
2062
Male, age 76, both hemispheres
102.2
2365
Male, age 74, right hemisphere
95.5
2126
Male, age 61, both hemispheres
81.5
2795
Female, age 91, both hemispheres
76.2
2697
Female, age 85, both hemispheres
66.6
2327
Male, age 80, both hemispheres
59.2
Motor trigeminal nucleus nTPM: 74.8
2560
Male, age 74, both hemispheres
84.9
2309
Male, age 76, both hemispheres
81.4
2321
Female, age 91, both hemispheres
70.3
2079
Male, age 80, both hemispheres
69.9
2335
Male, age 61, both hemispheres
67.2
Nuclei of the trapezoid body nTPM: 83.8
1983
Male, age 76, both hemispheres
99.4
2159
Male, age 61, both hemispheres
91.5
2735
Female, age 85, both hemispheres
89.6
2368
Female, age 91, both hemispheres
71.0
2166
Male, age 80, both hemispheres
67.4
Nucleus raphe magnus nTPM: 80.4
2160
Male, age 61, both hemispheres
95.0
2455
Male, age 74, both hemispheres
87.0
2172
Female, age 85, both hemispheres
79.2
2459
Female, age 91, both hemispheres
77.1
2051
Male, age 76, both hemispheres
76.2
2328
Male, age 80, both hemispheres
68.1
Paramedian reticular nucleus nTPM: 95.8
2057
Male, age 80, both hemispheres
110.7
2052
Male, age 76, both hemispheres
93.1
2050
Female, age 85, both hemispheres
91.8
2313
Male, age 61, both hemispheres
87.7
Pedunculopontine tegmental nucleus nTPM: 83.9
2334
Male, age 80, both hemispheres
98.1
1921
Female, age 85, both hemispheres
91.1
2338
Male, age 61, both hemispheres
62.5
Pontine nuclei nTPM: 95.2
2727
Male, age 61, right hemisphere
119.4
1863
Male, age 55, unknown
108.2
2109
Female, age 72, unknown
104.8
2454
Male, age 74, left hemisphere
99.2
2787
Female, age 85, both hemispheres
92.1
1968
Male, age 76, left hemisphere
89.0
2115
Male, age 80, left hemisphere
77.4
2319
Female, age 91, both hemispheres
71.5
Pontine raphe nucleus nTPM: 89.0
2122
Female, age 85, midline
93.4
2853
Male, age 76, midline
84.5
Posteroventral cochlear nucleus nTPM: 87.2
2752
Female, age 85, both hemispheres
95.8
2341
Male, age 80, both hemispheres
94.3
2371
Male, age 61, both hemispheres
92.4
2070
Male, age 76, both hemispheres
80.8
2135
Female, age 91, both hemispheres
73.0
Principal sensory trigeminal nucleus nTPM: 78.5
2158
Male, age 61, both hemispheres
88.4
2324
Male, age 76, both hemispheres
82.3
2367
Female, age 91, left hemisphere
72.2
2008
Male, age 80, left hemisphere
71.1
Reticular pontine nucleus, caudal nTPM: 79.3
2559
Male, age 74, both hemispheres
89.4
2092
Male, age 76, both hemispheres
84.4
2457
Female, age 91, both hemispheres
83.5
2332
Male, age 80, right hemisphere
60.1
Reticular pontine nucleus, oral nTPM: 97.0
2361
Male, age 74, both hemispheres
141.5
1939
Male, age 80, both hemispheres
104.5
2012
Female, age 85, both hemispheres
90.6
2167
Male, age 76, both hemispheres
84.2
2366
Female, age 91, both hemispheres
64.0
Reticulotegmental nucleus nTPM: 80.1
2325
Male, age 76, both hemispheres
84.3
2322
Female, age 91, both hemispheres
81.7
2452
Male, age 74, both hemispheres
80.2
2333
Male, age 80, both hemispheres
74.5
Spinal trigeminal nucleus, oral nTPM: 87.8
2737
Female, age 85, both hemispheres
97.2
2164
Male, age 80, both hemispheres
83.5
1978
Male, age 76, both hemispheres
82.7
Subcoeruleus area nTPM: 86.8
2369
Female, age 85, left hemisphere
93.8
2323
Female, age 91, left hemisphere
93.4
1958
Male, age 80, both hemispheres
89.7
2451
Male, age 74, both hemispheres
87.8
2089
Male, age 76, left hemisphere
69.4
Superior olive nTPM: 81.9
1875
Female, age 85, both hemispheres
100.5
2364
Male, age 74, right hemisphere
96.3
2020
Male, age 76, both hemispheres
85.3
2329
Male, age 80, right hemisphere
64.0
2561
Female, age 91, both hemispheres
63.1
Ventral periolivary nuclei nTPM: 76.7
2023
Male, age 76, both hemispheres
88.9
2130
Female, age 85, both hemispheres
80.9
2165
Male, age 80, both hemispheres
77.5
2794
Female, age 91, left hemisphere
59.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 79.5
2449
Male, age 74, both hemispheres
85.4
1959
Male, age 76, both hemispheres
81.0
2456
Female, age 91, both hemispheres
80.2
2840
Female, age 85, both hemispheres
79.8
2359
Male, age 61, both hemispheres
75.5
2161
Male, age 80, both hemispheres
75.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
73.8
Pig sample
Sample description
nTPM
Pons nTPM: 73.9
Samples: 4
Max nTPM: 75.5
Min nTPM: 70.9
Sample A
Female
74.8
Sample B
Female
70.9
Sample C
Male
75.5
Sample D
Male
74.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
