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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
86.8
nTPM
HPA Brain:
57.9
nTPM
GTEx:
86.8
nTPM
FANTOM5:
198.3
Scaled Tags Per Million
Pig:
50.5
nTPM
Mouse:
155.8
nTPM
Allen mouse:
12.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
57.9
Sample id
Sample description
nTPM
Amygdala nTPM: 57.9
2814
Male, age 76, right hemisphere
76.2
2514
Male, age 75, right hemisphere
59.2
2517
Female, age 94, left hemisphere
53.6
2695
Female, age 67, right hemisphere
50.4
1987
Female, age 91, left hemisphere
50.2
Basal amygdala nTPM: 44.8
1955
Male, age 76, both hemispheres
59.1
2609
Male, age 75, right hemisphere
47.5
2110
Male, age 80, left hemisphere
45.6
2243
Female, age 91, right hemisphere
45.5
2685
Female, age 94, left hemisphere
42.2
2827
Female, age 67, right hemisphere
28.9
Central amygdala nTPM: 51.6
1905
Male, age 76, both hemispheres
70.0
2239
Male, age 80, left hemisphere
51.3
2826
Female, age 94, left hemisphere
49.0
2515
Male, age 75, right hemisphere
45.0
2701
Female, age 91, right hemisphere
42.4
Corticomedial amygdala nTPM: 47.2
2240
Male, age 76, both hemispheres
63.3
2429
Female, age 94, left hemisphere
48.6
2242
Female, age 91, right hemisphere
45.2
2829
Male, age 80, left hemisphere
44.0
2428
Male, age 75, right hemisphere
43.2
2535
Female, age 67, right hemisphere
38.7
Lateral amygdala nTPM: 44.1
1883
Male, age 76, both hemispheres
64.3
2534
Female, age 94, left hemisphere
52.3
2516
Male, age 75, right hemisphere
48.0
2256
Male, age 80, left hemisphere
35.2
2255
Female, age 91, right hemisphere
35.0
2830
Female, age 67, right hemisphere
29.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
86.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 86.8
Samples: 152
Max nTPM: 383.6
Min nTPM: 40.4
Std nTPM: 45.8
Median nTPM: 78.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
383.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
372.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
257.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
253.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
196.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
174.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
148.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
145.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
140.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
126.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
123.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
120.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
118.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
117.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
116.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
116.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
114.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
113.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
111.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
110.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
109.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
105.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
105.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
104.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
103.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
102.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
102.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
101.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
100.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
98.4
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
98.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
98.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
97.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
96.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
95.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
95.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
95.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
95.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
95.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
93.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
92.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
91.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
91.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
89.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
89.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
88.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
87.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
87.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
86.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
86.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
85.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
85.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
85.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
84.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
84.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
84.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
83.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
83.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
83.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
83.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
82.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
82.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
81.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
81.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
81.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
81.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
81.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
80.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
80.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
80.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
79.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
79.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
79.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
79.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
78.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
78.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
77.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
77.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
77.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
76.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
76.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
76.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
75.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
75.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
74.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
74.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
73.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
73.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
72.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
72.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
72.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
72.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
72.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
72.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
71.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
71.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
70.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
70.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
70.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
69.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
69.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
68.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
67.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
67.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
66.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
66.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
66.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
65.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
65.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
64.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
63.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
63.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
63.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
62.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
62.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
61.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
61.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
61.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
60.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
60.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
60.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
60.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
60.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
59.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
59.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
59.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
59.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
59.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
59.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
57.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
57.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
57.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
57.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
57.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
57.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
56.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
56.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
56.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
55.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
55.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
54.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
54.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
53.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
52.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
52.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
51.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
50.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
49.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
48.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
45.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
44.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
40.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
155.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 155.8
Samples: 4
Max nTPM: 162.5
Min nTPM: 148.8
Sample A
Male
154.0
Sample B
Male
157.8
Sample C
Female
162.5
Sample D
Female
148.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.