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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
52.0
nTPM
HPA Brain:
36.4
nTPM
GTEx:
52.0
nTPM
FANTOM5:
25.8
Scaled Tags Per Million
Pig:
4.5
nTPM
Mouse:
8.3
nTPM
Allen mouse:
0.3
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.4
Sample id
Sample description
nTPM
Amygdala nTPM: 36.4
1987
Female, age 91, left hemisphere
42.8
2695
Female, age 67, right hemisphere
39.8
2514
Male, age 75, right hemisphere
34.7
2814
Male, age 76, right hemisphere
33.0
2517
Female, age 94, left hemisphere
31.7
Basal amygdala nTPM: 26.4
2110
Male, age 80, left hemisphere
32.3
2609
Male, age 75, right hemisphere
30.2
1955
Male, age 76, both hemispheres
29.6
2685
Female, age 94, left hemisphere
22.6
2243
Female, age 91, right hemisphere
22.1
2827
Female, age 67, right hemisphere
21.8
Central amygdala nTPM: 31.7
2826
Female, age 94, left hemisphere
39.5
1905
Male, age 76, both hemispheres
35.2
2515
Male, age 75, right hemisphere
34.7
2239
Male, age 80, left hemisphere
24.8
2701
Female, age 91, right hemisphere
24.6
Corticomedial amygdala nTPM: 25.1
2428
Male, age 75, right hemisphere
32.6
2242
Female, age 91, right hemisphere
28.8
2829
Male, age 80, left hemisphere
25.1
2429
Female, age 94, left hemisphere
24.9
2240
Male, age 76, both hemispheres
20.6
2535
Female, age 67, right hemisphere
18.8
Lateral amygdala nTPM: 32.3
2256
Male, age 80, left hemisphere
37.4
1883
Male, age 76, both hemispheres
32.9
2830
Female, age 67, right hemisphere
32.7
2516
Male, age 75, right hemisphere
32.1
2534
Female, age 94, left hemisphere
30.8
2255
Female, age 91, right hemisphere
27.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
52.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 52.0
Samples: 152
Max nTPM: 112.0
Min nTPM: 16.7
Std nTPM: 19.7
Median nTPM: 49.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
112.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
111.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
101.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
99.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
97.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
94.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
94.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
92.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
87.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
86.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
85.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
83.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
82.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
80.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
78.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
77.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
77.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
76.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
75.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
74.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
73.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
73.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
72.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
72.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
70.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
70.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
70.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
70.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
69.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
68.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
68.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
67.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
66.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
66.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
66.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
65.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
64.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
63.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
62.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
62.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
62.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
62.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
61.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
61.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
61.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
61.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
60.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
60.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
60.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
60.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
59.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
59.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
57.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
56.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
56.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
56.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
55.8
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
55.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
54.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
54.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
53.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
53.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
52.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
52.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
52.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
52.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
52.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
52.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
52.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
51.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
50.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
50.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
50.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
49.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
49.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
48.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
48.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
47.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
47.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
47.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
46.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
46.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
46.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
45.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
45.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
45.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
45.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
44.6
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
44.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
44.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
44.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
44.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
44.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
44.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
43.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
43.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
42.3
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
41.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
41.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
40.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
39.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
39.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
38.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
38.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
38.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
37.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
37.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
37.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
37.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
37.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
37.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
37.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
36.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
36.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
36.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
36.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
36.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
35.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
35.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
35.6
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
35.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
34.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
34.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
33.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
33.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
31.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
31.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
30.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
30.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
30.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
29.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
29.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
29.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
29.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
28.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
27.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
26.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
26.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
25.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
25.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
25.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
25.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
24.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
24.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
23.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
23.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
19.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
17.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
16.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
8.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 8.3
Samples: 4
Max nTPM: 9.0
Min nTPM: 7.1
Sample A
Male
8.2
Sample B
Male
7.1
Sample C
Female
8.7
Sample D
Female
9.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.