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  • GGT5
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
Tissue methods
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:58.1 nTPM
GTEx:58.1 nTPM

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA008121Antibody CAB032489
Squamous epithelial cells Not detectedLow



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.1
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 58.1
Samples: 170

Max nTPM: 196.8
Min nTPM: 12.8
Std nTPM: 34.4
Median nTPM: 51.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 196.8
GTEX-R45C-2226-SM-GQ1EF 60-69 years, female 155.0
GTEX-147F3-1526-SM-5MR7L 50-59 years, female 153.9
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 148.6
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 143.5
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 137.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 137.2
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 133.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 128.3
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 126.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 124.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 116.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 115.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 114.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 113.8
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 113.1
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 107.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 106.6
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 101.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 99.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 99.0
GTEX-O5YV-2226-SM-HM8V7 60-69 years, female 97.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 96.3
GTEX-13FTY-2026-SM-GIN9K 40-49 years, female 95.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 94.7
GTEX-OXRK-2026-SM-GOQY5 50-59 years, female 91.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 91.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 91.2
GTEX-QCQG-1226-SM-48U23 50-59 years, female 88.1
GTEX-16MT8-2426-SM-GQ1DK 60-69 years, female 88.0
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 87.7
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 87.7
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 85.2
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 82.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 82.2
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 81.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 81.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 80.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 79.6
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 77.5
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 77.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 76.9
GTEX-14A5I-2726-SM-5MR84 50-59 years, female 76.8
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 75.6
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 75.0
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 73.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 72.9
GTEX-WI4N-2626-SM-GPI8F 40-49 years, female 72.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 71.5
GTEX-RTLS-2126-SM-GPRWH 60-69 years, female 70.9
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 70.7
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 68.8
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 68.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 68.4
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 67.5
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 67.2
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 66.8
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 66.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 66.2
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 65.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 64.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 61.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 60.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 60.7
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 59.9
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 59.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 59.7
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 59.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 58.9
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 58.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 58.2
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 58.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 57.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 57.0
GTEX-1C475-0526-SM-793AC 40-49 years, female 56.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 56.7
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 56.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 55.2
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 54.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 54.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 53.9
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 53.6
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 53.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 52.0
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 51.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 51.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 50.3
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 50.0
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 49.5
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 47.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 47.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 47.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 46.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 45.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 45.4
GTEX-WYBS-2826-SM-GOQYI 60-69 years, female 44.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 44.4
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 43.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 43.4
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 42.9
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 41.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 40.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 40.4
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 40.2
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 40.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 39.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 39.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 39.4
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 39.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 38.9
GTEX-16NPV-2526-SM-6M483 50-59 years, female 38.7
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 38.3
GTEX-S4UY-1026-SM-4AD53 40-49 years, female 38.0
GTEX-W5X1-2226-SM-GRR1G 40-49 years, female 37.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 37.2
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 36.9
GTEX-ZVZQ-2726-SM-GPRY1 60-69 years, female 36.5
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 36.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 35.9
GTEX-1MA7W-1226-SM-HL9SB 20-29 years, female 35.7
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 34.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 34.8
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 34.3
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 34.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 33.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 33.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 33.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 33.4
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 32.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 32.4
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 32.2
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 32.2
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 32.2
GTEX-139D8-2626-SM-GJ3QN 30-39 years, female 32.0
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 30.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 29.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 28.8
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 28.7
GTEX-RNOR-2526-SM-F21KT 50-59 years, female 28.6
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 27.9
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 27.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 27.2
GTEX-XYKS-2826-SM-H7OG8 60-69 years, female 27.0
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 26.9
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 25.7
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 24.9
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 24.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 23.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 23.3
GTEX-1LKK1-1826-SM-GNIPA 50-59 years, female 22.7
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 22.3
GTEX-11I78-2026-SM-5987C 50-59 years, female 20.3
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 19.5
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 19.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 19.3
GTEX-132AR-1626-SM-5EGHP 50-59 years, female 18.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 18.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 18.1
GTEX-ZAJG-2926-SM-5HL8P 50-59 years, female 16.8
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 16.5
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 16.4
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 15.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 15.4
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 14.4
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 14.4
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 13.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 13.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 13.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 12.8
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 12.8
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