HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:815.8 nTPM
HPA Brain:507.9 nTPM
GTEx:815.8 nTPM
FANTOM5:974.2 Scaled Tags Per Million
Pig:332.8 nTPM
Mouse:395.1 nTPM
Allen mouse:17.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 507.9
Sample id Sample description nTPM
Hippocampus
nTPM: 392.1
1898 Male, age 80, left hemisphere 562.3
1855 Male, age 76, left hemisphere 443.1
2529 Female, age 94, left hemisphere 373.0
2621 Female, age 67, right hemisphere 362.0
1911 Female, age 85, right hemisphere 346.9
2148 Female, age 91, left hemisphere 264.9
Dentate gyrus
nTPM: 371.3
2010 Male, age 76, both hemispheres 521.5
1927 Female, age 91, both hemispheres 440.7
2246 Female, age 85, both hemispheres 381.4
2528 Male, age 74, both hemispheres 327.1
2530 Female, age 94, left hemisphere 317.4
2531 Female, age 67, both hemispheres 240.0
Entorhinal gyrus
nTPM: 369.5
1938 Female, age 85, left hemisphere 535.0
2764 Male, age 80, right hemisphere 472.0
1787 Male, age 76, left hemisphere 421.6
2117 Female, age 91, right hemisphere 300.9
2613 Female, age 94, left hemisphere 267.9
2686 Male, age 75, right hemisphere 219.2
Hippocampus, CA1
nTPM: 476.4
2749 Male, age 80, left hemisphere 771.3
1873 Female, age 85, both hemispheres 478.6
2045 Male, age 76, both hemispheres 424.7
2527 Male, age 74, both hemispheres 403.0
2082 Female, age 91, right hemisphere 304.5
Hippocampus, CA2
nTPM: 408.1
1892 Male, age 76, both hemispheres 551.1
1963 Male, age 80, left hemisphere 518.2
2249 Male, age 74, both hemispheres 483.4
2437 Female, age 94, left hemisphere 316.8
1940 Female, age 85, left hemisphere 300.2
2113 Female, age 91, right hemisphere 279.0
Hippocampus, CA3
nTPM: 403.3
2137 Male, age 80, left hemisphere 602.3
1867 Male, age 76, both hemispheres 476.5
2436 Male, age 74, both hemispheres 466.1
1891 Female, age 85, both hemispheres 378.9
2620 Female, age 94, left hemisphere 296.4
2861 Female, age 67, both hemispheres 199.4
Parahippocampal cortex
nTPM: 365.8
1850 Male, age 80, both hemispheres 562.6
2018 Male, age 76, both hemispheres 452.3
1933 Female, age 85, both hemispheres 452.1
1990 Female, age 91, right hemisphere 405.8
2245 Female, age 91, both hemispheres 352.0
2250 Female, age 67, right hemisphere 349.7
2532 Female, age 72, left hemisphere 338.3
2692 Male, age 74, both hemispheres 272.1
2693 Female, age 94, both hemispheres 259.2
2622 Female, age 67, right hemisphere 214.0
Perirhinal gyrus
nTPM: 507.9
1847 Female, age 91, left hemisphere 615.7
1794 Male, age 80, right hemisphere 572.2
1841 Female, age 85, right hemisphere 559.4
2848 Male, age 76, right hemisphere 460.3
2521 Female, age 94, right hemisphere 331.7
Subiculum
nTPM: 383.0
1901 Male, age 80, both hemispheres 458.5
1977 Female, age 85, both hemispheres 453.3
2042 Male, age 76, both hemispheres 417.8
2438 Female, age 94, left hemisphere 401.3
2619 Male, age 74, both hemispheres 288.9
2729 Female, age 91, right hemisphere 278.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 815.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 815.8
Samples: 197

Max nTPM: 2092.4
Min nTPM: 277.1
Std nTPM: 324.3
Median nTPM: 755.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2092.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1985.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1848.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1689.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 1683.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1657.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 1596.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 1506.2
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1485.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1479.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1460.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 974.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 974.2
FF:10169-103B7 60 years, female 1320.0
FF:10153-102I9 76 years, female 628.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 332.8
Pig sample Sample description nTPM
Subiculum
nTPM: 208.1
Samples: 4

Max nTPM: 253.2
Min nTPM: 182.3
Sample A Female 253.2
Sample B Female 195.1
Sample C Male 182.3
Sample D Male 201.6
Dorsal hippocampus
nTPM: 332.8
Samples: 4

Max nTPM: 470.6
Min nTPM: 249.6
Sample A Female 470.6
Sample B Female 335.9
Sample C Male 275.0
Sample D Male 249.6
Entorhinal cortex
nTPM: 173.5
Samples: 4

Max nTPM: 194.4
Min nTPM: 158.4
Sample A Female 194.4
Sample B Female 181.9
Sample C Male 159.3
Sample D Male 158.4
Ventral hippocampus
nTPM: 289.4
Samples: 4

Max nTPM: 399.0
Min nTPM: 177.3
Sample A Female 309.0
Sample B Female 177.3
Sample C Male 272.2
Sample D Male 399.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 395.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 300.3
Samples: 4

Max nTPM: 342.3
Min nTPM: 259.5
Sample A Male 259.5
Sample B Male 284.9
Sample C Female 342.3
Sample D Female 314.5
Hippocampal formation
nTPM: 395.1
Samples: 4

Max nTPM: 450.9
Min nTPM: 369.5
Sample A Male 450.9
Sample B Male 372.6
Sample C Female 387.4
Sample D Female 369.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 17.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.2
81600140 Antisense, RP_080312_03_A05, Mouse strain C57BL/6J (56 days, male) 17.7
69627021 Antisense, RP_050428_01_G02, Mouse strain C57BL/6J (56 days, male) 16.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org