HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:20.5 nTPM
HPA Brain:79.3 nTPM
GTEx:20.5 nTPM
FANTOM5:104.4 Scaled Tags Per Million
Pig:47.1 nTPM
Mouse:47.0 nTPM
Allen mouse:7.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB019402
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 79.3
Sample id Sample description nTPM
Hippocampus
nTPM: 72.2
1855 Male, age 76, left hemisphere 76.7
1898 Male, age 80, left hemisphere 76.4
2148 Female, age 91, left hemisphere 75.4
1911 Female, age 85, right hemisphere 71.0
2621 Female, age 67, right hemisphere 69.1
2529 Female, age 94, left hemisphere 64.8
Dentate gyrus
nTPM: 68.7
1927 Female, age 91, both hemispheres 84.7
2246 Female, age 85, both hemispheres 76.2
2010 Male, age 76, both hemispheres 70.6
2531 Female, age 67, both hemispheres 67.4
2528 Male, age 74, both hemispheres 61.2
2530 Female, age 94, left hemisphere 52.2
Entorhinal gyrus
nTPM: 60.2
1938 Female, age 85, left hemisphere 72.3
1787 Male, age 76, left hemisphere 60.6
2764 Male, age 80, right hemisphere 60.3
2117 Female, age 91, right hemisphere 58.4
2686 Male, age 75, right hemisphere 54.9
2613 Female, age 94, left hemisphere 54.7
Hippocampus, CA1
nTPM: 79.3
2749 Male, age 80, left hemisphere 108.0
1873 Female, age 85, both hemispheres 83.4
2045 Male, age 76, both hemispheres 77.0
2527 Male, age 74, both hemispheres 72.1
2082 Female, age 91, right hemisphere 56.0
Hippocampus, CA2
nTPM: 62.1
1963 Male, age 80, left hemisphere 73.7
1892 Male, age 76, both hemispheres 70.0
2113 Female, age 91, right hemisphere 59.9
2249 Male, age 74, both hemispheres 59.0
2437 Female, age 94, left hemisphere 56.5
1940 Female, age 85, left hemisphere 53.8
Hippocampus, CA3
nTPM: 74.0
2137 Male, age 80, left hemisphere 98.3
2620 Female, age 94, left hemisphere 77.1
1891 Female, age 85, both hemispheres 68.8
2861 Female, age 67, both hemispheres 67.4
2436 Male, age 74, both hemispheres 67.1
1867 Male, age 76, both hemispheres 65.4
Parahippocampal cortex
nTPM: 62.2
1850 Male, age 80, both hemispheres 70.6
2245 Female, age 91, both hemispheres 68.5
1933 Female, age 85, both hemispheres 66.0
2250 Female, age 67, right hemisphere 64.3
2692 Male, age 74, both hemispheres 61.1
2622 Female, age 67, right hemisphere 60.9
2693 Female, age 94, both hemispheres 60.2
1990 Female, age 91, right hemisphere 58.3
2532 Female, age 72, left hemisphere 58.2
2018 Male, age 76, both hemispheres 53.4
Perirhinal gyrus
nTPM: 68.8
1847 Female, age 91, left hemisphere 75.2
1794 Male, age 80, right hemisphere 69.3
1841 Female, age 85, right hemisphere 69.2
2521 Female, age 94, right hemisphere 68.4
2848 Male, age 76, right hemisphere 61.8
Subiculum
nTPM: 65.1
2438 Female, age 94, left hemisphere 73.3
1901 Male, age 80, both hemispheres 69.1
1977 Female, age 85, both hemispheres 65.9
2619 Male, age 74, both hemispheres 64.8
2729 Female, age 91, right hemisphere 60.0
2042 Male, age 76, both hemispheres 57.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 20.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.5
Samples: 197

Max nTPM: 34.7
Min nTPM: 12.7
Std nTPM: 4.0
Median nTPM: 19.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 34.7
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 31.0
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 30.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 30.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 29.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 29.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 29.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 28.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 28.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 28.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 28.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 104.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 104.4
FF:10169-103B7 60 years, female 113.2
FF:10153-102I9 76 years, female 95.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 47.1
Pig sample Sample description nTPM
Subiculum
nTPM: 44.9
Samples: 4

Max nTPM: 50.9
Min nTPM: 40.5
Sample A Female 50.9
Sample B Female 43.7
Sample C Male 44.4
Sample D Male 40.5
Dorsal hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 50.8
Min nTPM: 42.2
Sample A Female 49.7
Sample B Female 50.8
Sample C Male 42.2
Sample D Male 43.5
Entorhinal cortex
nTPM: 44.4
Samples: 4

Max nTPM: 52.2
Min nTPM: 39.6
Sample A Female 52.2
Sample B Female 40.0
Sample C Male 45.9
Sample D Male 39.6
Ventral hippocampus
nTPM: 47.1
Samples: 4

Max nTPM: 53.0
Min nTPM: 39.0
Sample A Female 47.2
Sample B Female 39.0
Sample C Male 49.3
Sample D Male 53.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.0
Samples: 4

Max nTPM: 50.9
Min nTPM: 37.2
Sample A Male 44.8
Sample B Male 37.2
Sample C Female 39.2
Sample D Female 50.9
Hippocampal formation
nTPM: 47.0
Samples: 4

Max nTPM: 59.4
Min nTPM: 37.2
Sample A Male 37.2
Sample B Male 52.0
Sample C Female 59.4
Sample D Female 39.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.4
69289471 Antisense, RP_050407_03_C08, Mouse strain C57BL/6J (56 days, male) 7.4

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