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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
51.3
nTPM
HPA Brain:
69.3
nTPM
GTEx:
51.3
nTPM
FANTOM5:
115.4
Scaled Tags Per Million
Pig:
98.1
nTPM
Mouse:
94.8
nTPM
Allen mouse:
16.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
69.3
Sample id
Sample description
nTPM
Amygdala nTPM: 59.8
2514
Male, age 75, right hemisphere
73.9
1987
Female, age 91, left hemisphere
63.1
2517
Female, age 94, left hemisphere
61.2
2695
Female, age 67, right hemisphere
53.1
2814
Male, age 76, right hemisphere
47.8
Basal amygdala nTPM: 67.0
2685
Female, age 94, left hemisphere
83.7
2243
Female, age 91, right hemisphere
77.7
2110
Male, age 80, left hemisphere
73.9
1955
Male, age 76, both hemispheres
55.9
2609
Male, age 75, right hemisphere
55.4
2827
Female, age 67, right hemisphere
55.4
Central amygdala nTPM: 54.8
2239
Male, age 80, left hemisphere
64.4
2701
Female, age 91, right hemisphere
61.6
2826
Female, age 94, left hemisphere
61.6
2515
Male, age 75, right hemisphere
44.4
1905
Male, age 76, both hemispheres
41.9
Corticomedial amygdala nTPM: 69.3
2829
Male, age 80, left hemisphere
85.6
2429
Female, age 94, left hemisphere
79.4
2242
Female, age 91, right hemisphere
72.5
2240
Male, age 76, both hemispheres
61.4
2428
Male, age 75, right hemisphere
58.9
2535
Female, age 67, right hemisphere
58.1
Lateral amygdala nTPM: 57.3
2534
Female, age 94, left hemisphere
80.0
2256
Male, age 80, left hemisphere
62.7
2255
Female, age 91, right hemisphere
57.7
1883
Male, age 76, both hemispheres
50.1
2516
Male, age 75, right hemisphere
48.2
2830
Female, age 67, right hemisphere
44.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
51.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 51.3
Samples: 152
Max nTPM: 119.3
Min nTPM: 17.0
Std nTPM: 18.3
Median nTPM: 50.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
119.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
108.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
104.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
91.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
91.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
88.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
84.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
83.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
79.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
78.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
78.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
78.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
77.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
73.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
72.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
72.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
72.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
72.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
72.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
71.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
71.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
71.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
70.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
70.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
70.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
70.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
68.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
68.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
68.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
66.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
66.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
65.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
64.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
64.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
64.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
63.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
63.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
63.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
63.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
62.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
62.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
62.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
61.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
60.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
60.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
60.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
60.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
60.4
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
60.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
59.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
59.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
58.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
56.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
56.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
55.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
55.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
55.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
54.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
54.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
53.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
53.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
53.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
52.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
52.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
52.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
52.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
52.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
51.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
51.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
51.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
51.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
50.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
50.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
50.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
49.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
49.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
49.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
49.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
48.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
48.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
47.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
47.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
45.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
45.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
45.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
45.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
44.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
43.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
43.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
43.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
42.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
42.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
42.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
42.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
41.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
41.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
41.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
41.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
40.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
40.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
39.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
39.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
38.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
38.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
38.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
38.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
38.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
37.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
37.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
37.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
36.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
36.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
36.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
35.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
35.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
35.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
34.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
34.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
34.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
34.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
34.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
33.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
33.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
33.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
32.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
32.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
31.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
31.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
30.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
30.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
30.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
29.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
29.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
28.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
28.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
27.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
27.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
27.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
27.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
26.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
26.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
25.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
23.7
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
22.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
20.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
20.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
17.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
94.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 94.8
Samples: 4
Max nTPM: 96.4
Min nTPM: 92.9
Sample A
Male
96.4
Sample B
Male
92.9
Sample C
Female
94.7
Sample D
Female
95.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
