HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:40.7 nTPM
HPA Brain:35.6 nTPM
GTEx:40.7 nTPM
FANTOM5:62.7 Scaled Tags Per Million
Pig:78.4 nTPM
Mouse:56.9 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035011
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 35.6
Sample id Sample description nTPM
Hippocampus
nTPM: 31.6
1898 Male, age 80, left hemisphere 39.1
2148 Female, age 91, left hemisphere 37.5
2529 Female, age 94, left hemisphere 31.0
1855 Male, age 76, left hemisphere 30.1
1911 Female, age 85, right hemisphere 29.0
2621 Female, age 67, right hemisphere 22.7
Dentate gyrus
nTPM: 35.6
2010 Male, age 76, both hemispheres 44.1
1927 Female, age 91, both hemispheres 43.6
2528 Male, age 74, both hemispheres 39.7
2530 Female, age 94, left hemisphere 37.9
2531 Female, age 67, both hemispheres 25.3
2246 Female, age 85, both hemispheres 23.0
Entorhinal gyrus
nTPM: 25.5
1938 Female, age 85, left hemisphere 37.6
1787 Male, age 76, left hemisphere 27.1
2117 Female, age 91, right hemisphere 24.2
2613 Female, age 94, left hemisphere 22.7
2686 Male, age 75, right hemisphere 21.2
2764 Male, age 80, right hemisphere 20.5
Hippocampus, CA1
nTPM: 32.0
1873 Female, age 85, both hemispheres 43.8
2082 Female, age 91, right hemisphere 32.5
2527 Male, age 74, both hemispheres 31.7
2749 Male, age 80, left hemisphere 27.9
2045 Male, age 76, both hemispheres 24.3
Hippocampus, CA2
nTPM: 31.5
2437 Female, age 94, left hemisphere 40.6
1892 Male, age 76, both hemispheres 36.6
2249 Male, age 74, both hemispheres 32.5
1940 Female, age 85, left hemisphere 28.7
1963 Male, age 80, left hemisphere 27.9
2113 Female, age 91, right hemisphere 22.8
Hippocampus, CA3
nTPM: 30.9
1867 Male, age 76, both hemispheres 41.0
1891 Female, age 85, both hemispheres 39.8
2137 Male, age 80, left hemisphere 33.9
2436 Male, age 74, both hemispheres 27.4
2620 Female, age 94, left hemisphere 24.6
2861 Female, age 67, both hemispheres 18.4
Parahippocampal cortex
nTPM: 32.4
1990 Female, age 91, right hemisphere 46.5
1850 Male, age 80, both hemispheres 39.8
2250 Female, age 67, right hemisphere 35.8
2245 Female, age 91, both hemispheres 33.4
1933 Female, age 85, both hemispheres 32.8
2532 Female, age 72, left hemisphere 31.5
2693 Female, age 94, both hemispheres 30.9
2018 Male, age 76, both hemispheres 29.8
2692 Male, age 74, both hemispheres 24.1
2622 Female, age 67, right hemisphere 19.5
Perirhinal gyrus
nTPM: 33.8
2521 Female, age 94, right hemisphere 36.1
1841 Female, age 85, right hemisphere 36.0
1847 Female, age 91, left hemisphere 34.3
2848 Male, age 76, right hemisphere 32.5
1794 Male, age 80, right hemisphere 30.0
Subiculum
nTPM: 33.5
1977 Female, age 85, both hemispheres 40.7
1901 Male, age 80, both hemispheres 35.4
2042 Male, age 76, both hemispheres 35.4
2438 Female, age 94, left hemisphere 32.1
2729 Female, age 91, right hemisphere 32.0
2619 Male, age 74, both hemispheres 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.7
Samples: 197

Max nTPM: 113.0
Min nTPM: 19.3
Std nTPM: 12.1
Median nTPM: 38.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 113.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 93.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 74.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 73.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 69.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 69.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 65.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 64.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 63.7
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 62.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 59.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 62.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.7
FF:10153-102I9 76 years, female 82.8
FF:10169-103B7 60 years, female 42.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 78.4
Pig sample Sample description nTPM
Subiculum
nTPM: 77.3
Samples: 4

Max nTPM: 89.5
Min nTPM: 63.8
Sample A Female 89.5
Sample B Female 79.7
Sample C Male 63.8
Sample D Male 76.2
Dorsal hippocampus
nTPM: 73.1
Samples: 4

Max nTPM: 81.7
Min nTPM: 64.1
Sample A Female 80.3
Sample B Female 66.4
Sample C Male 81.7
Sample D Male 64.1
Entorhinal cortex
nTPM: 78.4
Samples: 4

Max nTPM: 91.2
Min nTPM: 71.6
Sample A Female 73.3
Sample B Female 91.2
Sample C Male 77.5
Sample D Male 71.6
Ventral hippocampus
nTPM: 68.6
Samples: 4

Max nTPM: 72.6
Min nTPM: 62.3
Sample A Female 71.2
Sample B Female 68.2
Sample C Male 62.3
Sample D Male 72.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 56.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.2
Samples: 4

Max nTPM: 62.5
Min nTPM: 49.6
Sample A Male 51.1
Sample B Male 62.5
Sample C Female 57.7
Sample D Female 49.6
Hippocampal formation
nTPM: 56.9
Samples: 4

Max nTPM: 62.0
Min nTPM: 53.4
Sample A Male 57.4
Sample B Male 62.0
Sample C Female 54.8
Sample D Female 53.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
73514797 Antisense, RP_051121_03_B05, Mouse strain C57BL/6J (56 days, male) 0.7

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