We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
SLC1A3
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • SLC1A3
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

190.169
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:173.7 nTPM
HPA Brain:286.7 nTPM
GTEx:173.7 nTPM
Pig:732.7 nTPM
Mouse:421.2 nTPM
Allen mouse:4.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA037467
Hypothalamus mean intensity 190.169
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 84.271
Mammillary nucleus 16.713
Periventricular hypothalamic nucleus 190.169
Supraoptic nucleus 103.416
Tuberal nucleus 99.401
Ventral tuberomammillary nucleus 24.324
Lateral preoptic area 31.793
Medial preoptic area 78.075
Suprachiasmatic nucleus 138.387
Paraventricular hypothalamic nucleus 98.677
Anterior hypothalamic area, central 55.245
Ventral medial hypothalamic nucleus 38.679
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 143.704
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 51.752
Dorsal medial hypothalamic nucleus 55.013
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

286.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 204.4
1961 Female, age 42, unknown 229.6
2226 Male, age 75, left hemisphere 179.3
Dorsomedial nucleus
nTPM: 286.0
1989 Male, age 62, unknown 337.0
2041 Female, age 72, unknown 308.7
2017 Female, age 42, unknown 212.1
Lateral hypothalamic area
nTPM: 145.2
1791 Male, age 80, right hemisphere 253.1
2412 Male, age 62, unknown 127.8
2271 Male, age 75, both hemispheres 124.7
2228 Male, age 66, unknown 75.4
Mammillary body
nTPM: 224.7
1945 Male, age 80, right hemisphere 289.2
2413 Male, age 66, unknown 261.1
1834 Female, age 42, unknown 235.0
1923 Female, age 72, unknown 193.8
1948 Female, age 72, unknown 144.3
Paraventricular nucleus
nTPM: 119.2
2700 Male, age 62, unknown 119.2
Preoptic area
nTPM: 252.2
1861 Female, age 42, unknown 339.1
1907 Male, age 80, right hemisphere 288.4
2414 Female, age 72, unknown 129.1
Supraoptic nucleus
nTPM: 229.0
1894 Female, age 72, unknown 321.4
2043 Male, age 62, unknown 200.7
2835 Female, age 72, unknown 164.9
Ventromedial nucleus
nTPM: 286.7
1822 Female, age 42, unknown 311.3
1982 Female, age 72, unknown 262.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 173.7
Samples: 257

Max nTPM: 866.2
Min nTPM: 25.4
Std nTPM: 96.2
Median nTPM: 155.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 866.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 506.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 477.5
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 459.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 422.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 397.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 388.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 383.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 382.9
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 382.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 377.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 374.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 363.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 357.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 355.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 346.5
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 340.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 335.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 325.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 323.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 319.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 313.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 310.6
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 307.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 306.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 304.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 303.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 294.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 288.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 284.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 278.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 276.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 273.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 272.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 267.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 262.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 253.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 249.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 247.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 246.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 245.4
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 241.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 238.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 236.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 234.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 233.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 233.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 230.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 230.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 229.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 226.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 223.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 222.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 221.7
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 221.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 218.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 214.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 213.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 210.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 210.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 209.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 207.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 205.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 204.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 203.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 203.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 202.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 201.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 199.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 199.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 198.9
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 198.6
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 198.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 198.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 197.5
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 197.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 196.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 194.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 194.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 193.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 193.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 192.4
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 192.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 188.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 188.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 187.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 185.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 185.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 185.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 183.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 183.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 183.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 183.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 182.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 182.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 181.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 181.0
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 180.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 180.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 178.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 178.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 177.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 177.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 176.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 176.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 175.1
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 174.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 174.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 174.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 172.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 172.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 172.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 171.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 170.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 168.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 168.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 166.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 166.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 166.2
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 165.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 165.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 162.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 161.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 159.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 158.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 158.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 157.5
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 155.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 155.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 155.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 154.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 154.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 153.8
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 152.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 151.1
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 150.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 150.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 150.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 150.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 148.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 148.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 148.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 148.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 147.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 147.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 147.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 145.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 144.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 143.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 143.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 141.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 140.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 138.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 138.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 137.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 135.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 135.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 134.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 133.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 133.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 132.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 132.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 131.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 130.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 130.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 130.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 129.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 128.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 127.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 126.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 126.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 125.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 124.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 123.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 122.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 121.7
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 119.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 118.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 117.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 116.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 116.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 114.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 114.6
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 114.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 114.1
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 113.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 112.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 111.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 109.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 107.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 106.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 105.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 104.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 103.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 103.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 103.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 102.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 102.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 102.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 102.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 101.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 101.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 101.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 101.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 100.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 100.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 99.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 97.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 97.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 94.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 93.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 93.6
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 93.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 91.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 91.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 91.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 91.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 90.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 90.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 89.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 88.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 87.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 86.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 86.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 85.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 85.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 85.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 83.8
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 83.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 82.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 82.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 82.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 80.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 80.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 77.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 77.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 77.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 76.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 75.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 73.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 72.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 71.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 71.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 69.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 68.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 67.9
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 67.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 61.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 60.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 57.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 55.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 55.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 51.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 38.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 36.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 28.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 25.4
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

732.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 732.7
Samples: 4

Max nTPM: 955.8
Min nTPM: 585.9
Sample A Female 955.8
Sample B Female 776.1
Sample C Male 585.9
Sample D Male 613.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

421.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 421.2
Samples: 4

Max nTPM: 459.3
Min nTPM: 374.6
Sample A Male 374.6
Sample B Male 459.3
Sample C Female 421.8
Sample D Female 429.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 4.8
77620233 Antisense, RP_070129_03_B08, Mouse strain C57BL/6J (56 days, male) 4.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo