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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • STRUCTURE

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  • SDF4
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

82.316
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:41.8 nTPM
HPA Brain:66.8 nTPM
GTEx:41.8 nTPM
Pig:58.3 nTPM
Mouse:232.9 nTPM
Allen mouse:6.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA011895
Hypothalamus mean intensity 82.316
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 30.055
Mammillary nucleus 20.655
Periventricular hypothalamic nucleus 82.316
Supraoptic nucleus 21.410
Tuberal nucleus 9.980
Ventral tuberomammillary nucleus 2.598
Lateral preoptic area 21.495
Medial preoptic area 57.744
Suprachiasmatic nucleus 74.099
Paraventricular hypothalamic nucleus 78.497
Anterior hypothalamic area, central 37.613
Ventral medial hypothalamic nucleus 31.794
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 48.490
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 28.970
Dorsal medial hypothalamic nucleus 51.293
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 66.8
2226 Male, age 75, left hemisphere 70.3
1961 Female, age 42, unknown 63.3
Dorsomedial nucleus
nTPM: 64.6
1989 Male, age 62, unknown 70.9
2041 Female, age 72, unknown 62.2
2017 Female, age 42, unknown 60.5
Lateral hypothalamic area
nTPM: 62.8
1791 Male, age 80, right hemisphere 72.5
2271 Male, age 75, both hemispheres 63.4
2228 Male, age 66, unknown 60.0
2412 Male, age 62, unknown 55.3
Mammillary body
nTPM: 63.3
2413 Male, age 66, unknown 65.4
1945 Male, age 80, right hemisphere 64.2
1923 Female, age 72, unknown 62.9
1834 Female, age 42, unknown 62.3
1948 Female, age 72, unknown 62.0
Paraventricular nucleus
nTPM: 65.4
2700 Male, age 62, unknown 65.4
Preoptic area
nTPM: 59.6
1861 Female, age 42, unknown 63.6
1907 Male, age 80, right hemisphere 58.1
2414 Female, age 72, unknown 57.1
Supraoptic nucleus
nTPM: 63.7
2835 Female, age 72, unknown 71.6
2043 Male, age 62, unknown 63.9
1894 Female, age 72, unknown 55.7
Ventromedial nucleus
nTPM: 59.4
1822 Female, age 42, unknown 59.7
1982 Female, age 72, unknown 59.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 41.8
Samples: 257

Max nTPM: 76.2
Min nTPM: 23.3
Std nTPM: 6.9
Median nTPM: 41.2
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 76.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 63.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 62.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 62.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 58.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 57.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 56.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 55.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 53.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 53.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 53.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 53.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 53.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 53.0
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 52.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 52.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 52.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 51.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 51.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 51.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 50.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 50.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 50.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 50.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 50.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 50.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 50.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 50.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 50.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 50.0
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 49.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 49.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 49.7
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 49.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 49.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 49.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 49.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 49.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 48.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 48.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 48.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 48.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 48.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 48.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 47.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 47.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 47.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 47.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 47.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 47.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 47.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 47.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 46.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 46.6
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 46.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 46.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 46.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 46.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 46.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 46.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 45.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 45.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 45.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 45.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 45.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 45.5
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 45.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 45.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 45.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 44.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 44.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 44.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 44.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 44.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 44.3
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 44.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 44.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 44.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 44.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 44.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 44.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 43.9
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 43.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 43.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 43.7
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 43.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 43.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 43.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 43.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 43.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 43.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 43.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 43.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 43.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 43.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 43.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 43.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 43.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 43.1
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 43.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 43.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 42.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 42.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 42.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 42.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 42.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 42.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 42.4
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 42.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 42.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 42.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 42.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 42.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 42.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 42.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 42.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 42.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 42.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 41.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 41.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 41.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 41.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 41.5
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 41.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 41.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 41.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 41.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 41.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 41.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 41.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 41.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 41.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 41.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 41.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 40.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 40.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 40.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 40.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 40.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 40.6
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 40.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 40.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 40.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 40.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 40.3
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 40.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 40.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 40.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 39.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 39.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 39.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 39.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 39.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 39.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 39.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 39.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 39.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 39.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 39.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 39.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 39.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 39.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 39.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 39.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 39.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 39.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 39.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 38.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 38.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 38.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 38.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 38.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 38.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 38.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 38.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 38.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 38.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 38.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 38.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 38.0
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 38.0
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 37.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 37.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 37.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 37.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 37.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 37.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 37.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 37.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 37.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 37.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 37.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 37.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 36.9
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 36.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 36.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 36.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 36.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 36.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 36.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 36.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 36.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 36.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 36.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 36.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 35.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 35.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 35.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 35.9
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 35.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 35.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 35.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 35.8
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 35.6
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 35.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 35.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 35.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 35.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 34.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 34.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 34.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 34.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 34.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 34.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 34.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 34.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 33.9
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 33.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 33.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 33.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 33.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 33.5
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 33.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 33.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 32.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 32.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 32.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 32.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 32.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 32.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 32.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 32.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 31.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 31.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 31.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 31.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 30.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 30.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 30.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 28.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 28.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 27.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 26.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 25.5
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 23.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.3
Pig sample Sample description nTPM
Hypothalamus
nTPM: 58.3
Samples: 4

Max nTPM: 66.1
Min nTPM: 51.7
Sample A Female 66.1
Sample B Female 52.6
Sample C Male 62.7
Sample D Male 51.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 232.9
Samples: 4

Max nTPM: 242.3
Min nTPM: 228.6
Sample A Male 229.6
Sample B Male 242.3
Sample C Female 231.2
Sample D Female 228.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.9
69873457 Antisense, RP_050512_01_C10, Mouse strain C57BL/6J (56 days, male) 6.9

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