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  • SUMMARY

  • TISSUE

  • BRAIN

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  • GNB1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:170.3 nTPM
HPA Brain:388.8 nTPM
GTEx:170.3 nTPM
Pig:166.5 nTPM
Mouse:338.1 nTPM
Allen mouse:6.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

388.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 307.0
2226 Male, age 75, left hemisphere 345.5
1961 Female, age 42, unknown 268.5
Dorsomedial nucleus
nTPM: 328.7
1989 Male, age 62, unknown 379.2
2041 Female, age 72, unknown 327.0
2017 Female, age 42, unknown 279.9
Lateral hypothalamic area
nTPM: 388.8
2271 Male, age 75, both hemispheres 418.2
1791 Male, age 80, right hemisphere 406.5
2228 Male, age 66, unknown 404.3
2412 Male, age 62, unknown 326.1
Mammillary body
nTPM: 374.6
1923 Female, age 72, unknown 450.5
2413 Male, age 66, unknown 404.5
1948 Female, age 72, unknown 376.6
1834 Female, age 42, unknown 330.1
1945 Male, age 80, right hemisphere 311.5
Paraventricular nucleus
nTPM: 362.3
2700 Male, age 62, unknown 362.3
Preoptic area
nTPM: 331.5
1907 Male, age 80, right hemisphere 376.5
1861 Female, age 42, unknown 319.2
2414 Female, age 72, unknown 298.9
Supraoptic nucleus
nTPM: 312.1
2835 Female, age 72, unknown 327.3
2043 Male, age 62, unknown 311.7
1894 Female, age 72, unknown 297.3
Ventromedial nucleus
nTPM: 279.5
1982 Female, age 72, unknown 283.0
1822 Female, age 42, unknown 276.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 170.3
Samples: 257

Max nTPM: 332.1
Min nTPM: 118.5
Std nTPM: 34.6
Median nTPM: 162.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 332.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 330.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 322.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 299.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 285.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 268.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 263.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 252.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 249.8
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 247.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 242.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 238.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 237.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 232.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 232.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 231.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 230.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 224.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 222.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 221.4
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 219.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 215.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 214.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 213.9
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 213.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 213.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 212.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 211.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 209.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 208.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 208.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 207.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 203.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 202.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 202.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 201.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 201.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 200.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 200.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 199.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 198.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 197.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 196.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 196.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 195.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 195.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 195.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 195.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 194.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 193.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 192.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 192.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 191.3
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 189.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 188.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 187.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 187.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 186.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 186.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 185.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 185.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 184.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 183.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 183.1
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 182.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 182.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 181.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 181.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 181.6
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 181.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 180.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 180.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 180.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 179.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 179.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 179.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 179.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 177.6
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 177.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 177.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 176.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 176.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 175.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 175.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 175.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 174.4
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 174.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 173.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 173.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 173.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 173.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 172.4
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 171.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 171.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 171.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 171.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 170.2
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 169.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 168.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 168.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 168.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 167.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 167.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 167.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 166.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 165.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 165.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 165.5
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 165.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 165.1
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 165.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 165.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 165.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 164.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 164.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 163.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 163.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 163.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 163.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 163.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 163.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 163.3
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 163.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 162.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 162.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 162.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 162.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 162.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 162.2
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 162.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 161.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 161.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 161.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 161.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 161.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 161.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 161.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 160.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 160.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 160.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 160.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 159.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 158.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 158.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 158.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 158.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 158.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 157.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 156.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 156.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 156.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 155.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 155.8
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 155.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 155.1
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 155.0
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 154.9
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 154.9
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 154.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 154.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 154.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 154.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 154.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 154.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 154.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 154.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 153.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 153.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 153.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 153.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 153.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 152.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 152.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 151.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 151.6
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 151.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 151.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 151.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 151.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 150.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 150.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 150.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 150.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 150.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 149.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 149.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 149.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 149.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 149.1
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 148.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 148.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 148.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 148.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 148.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 148.1
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 147.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 147.2
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 147.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 147.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 147.1
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 147.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 146.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 146.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 146.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 145.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 145.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 145.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 144.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 144.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 143.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 143.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 143.5
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 143.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 143.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 143.0
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 142.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 142.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 141.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 141.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 141.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 141.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 141.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 140.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 140.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 140.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 140.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 139.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 139.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 138.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 137.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 137.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 137.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 137.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 136.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 136.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 135.5
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 135.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 134.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 134.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 133.9
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 133.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 133.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 131.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 131.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 131.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 130.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 130.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 129.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 128.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 127.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 127.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 126.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 126.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 125.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 122.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 120.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 118.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

166.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 166.5
Samples: 4

Max nTPM: 219.9
Min nTPM: 121.2
Sample A Female 219.9
Sample B Female 166.9
Sample C Male 158.0
Sample D Male 121.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

338.1
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 338.1
Samples: 4

Max nTPM: 352.1
Min nTPM: 319.8
Sample A Male 319.8
Sample B Male 346.4
Sample C Female 352.1
Sample D Female 334.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.9
61413 Antisense, RP_040407_01_C10, Mouse strain C57BL/6J (56 days, male) 12.9
70786827 Antisense, RP_050706_03_D02, Mouse strain C57BL/6J (56 days, male) 4.1
68203457 Antisense, RP_041208_01_A04, Mouse strain C57BL/6J (56 days, male) 3.8

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