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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1604.9 nTPM
HPA:1051.0 nTPM
GTEx:1604.9 nTPM
FANTOM5:2875.9 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA041264Antibody HPA041271Antibody CAB002621
Glandular cells MediumLowLow







SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1051.0
overview
Female, age 68
Salivary gland sample 216
nTPM: 1302.5
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 746.8
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1103.7
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1604.9
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1604.9
Samples: 181

Max nTPM: 5228.7
Min nTPM: 709.0
Std nTPM: 743.8
Median nTPM: 1323.8
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 5228.7
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 4676.1
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 3553.0
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 3419.7
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 3335.9
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 3314.0
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 3210.7
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 3084.4
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 3063.5
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 3044.3
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 2864.4
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 2853.6
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 2769.3
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 2762.7
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 2742.3
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 2690.4
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 2671.4
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 2640.2
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 2619.1
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 2617.2
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 2552.7
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 2548.8
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 2507.8
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 2468.8
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 2462.7
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 2448.7
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 2432.9
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 2431.5
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 2429.3
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 2428.4
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 2363.0
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 2326.8
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 2312.4
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 2259.6
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 2257.6
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 2246.8
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 2240.2
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 2175.7
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 2151.3
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 2133.8
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 2087.2
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 2070.9
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1965.0
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1955.7
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1930.6
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 1922.8
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 1922.1
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1911.4
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1907.0
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1904.6
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1892.2
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 1891.4
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1890.7
GTEX-11P82-0926-SM-5986X 20-29 years, male 1873.4
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1860.2
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1842.9
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1812.9
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1799.7
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 1798.3
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1781.7
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1711.0
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1706.6
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 1694.3
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1680.5
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1677.1
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 1670.4
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1650.8
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1629.1
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1579.2
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 1575.7
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1546.9
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1530.8
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1510.0
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1508.0
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1495.3
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1491.5
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1476.7
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1459.6
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1443.6
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1442.5
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 1425.9
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1418.9
GTEX-178AV-1426-SM-6LLID 40-49 years, male 1416.5
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 1410.1
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1400.0
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1392.0
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1354.4
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 1329.6
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1328.0
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1326.3
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1323.8
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1306.4
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1306.2
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 1300.2
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1292.8
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 1287.8
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1284.4
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 1271.2
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1268.6
GTEX-13O21-1926-SM-5MR39 50-59 years, male 1256.0
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1251.9
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1248.1
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 1247.2
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1246.0
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 1240.9
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 1238.8
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1236.4
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1225.3
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1218.5
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 1216.9
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1195.3
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 1192.5
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1191.9
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1188.0
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1185.1
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1185.1
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1166.6
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 1156.4
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1155.7
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1153.2
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1153.0
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1140.4
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1138.5
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1136.0
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1135.8
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 1127.3
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1125.1
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1123.1
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1106.4
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1105.3
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1103.8
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1100.6
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 1093.9
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1090.5
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1074.3
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1070.8
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1058.2
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1055.2
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1046.3
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1036.9
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1035.2
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1028.1
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1026.8
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1025.5
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1024.3
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1021.4
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1015.9
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1011.8
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 1007.6
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1001.7
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1000.4
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 996.4
GTEX-Y111-2626-SM-4TT24 50-59 years, male 991.8
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 985.9
GTEX-1B932-0626-SM-731EM 40-49 years, female 985.0
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 978.8
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 977.5
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 950.7
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 946.9
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 928.0
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 923.3
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 914.9
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 913.9
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 909.9
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 909.8
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 907.2
GTEX-1445S-2926-SM-5O993 60-69 years, male 899.0
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 890.1
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 886.9
GTEX-15SHV-2226-SM-6M464 60-69 years, male 874.8
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 856.5
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 851.5
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 844.1
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 834.0
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 822.2
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 807.2
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 806.8
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 790.2
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 765.9
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 723.2
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 709.0
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

2875.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 2875.9
FF:10199-103F1 23 years, male 2875.9
Salivary gland
Scaled Tags Per Million: 2604.6
FF:10093-102C3 16-60 years, mixed 2604.6
Submaxillary gland
Scaled Tags Per Million: 2419.9
FF:10202-103F4 24 years, male 2419.9

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