HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:72.2 nTPM
HPA Brain:38.6 nTPM
GTEx:72.2 nTPM
FANTOM5:60.1 Scaled Tags Per Million
Pig:122.2 nTPM
Mouse:285.0 nTPM
Allen mouse:24.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041981Antibody CAB034929
Glial cells LowNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1898 Male, age 80, left hemisphere 50.9
2621 Female, age 67, right hemisphere 35.2
2148 Female, age 91, left hemisphere 30.5
2529 Female, age 94, left hemisphere 26.2
1855 Male, age 76, left hemisphere 25.9
1911 Female, age 85, right hemisphere 25.5
Dentate gyrus
nTPM: 32.0
1927 Female, age 91, both hemispheres 42.6
2010 Male, age 76, both hemispheres 37.6
2528 Male, age 74, both hemispheres 35.7
2530 Female, age 94, left hemisphere 33.0
2246 Female, age 85, both hemispheres 24.2
2531 Female, age 67, both hemispheres 18.9
Entorhinal gyrus
nTPM: 30.0
2117 Female, age 91, right hemisphere 33.7
2764 Male, age 80, right hemisphere 32.0
1938 Female, age 85, left hemisphere 31.7
2613 Female, age 94, left hemisphere 31.5
1787 Male, age 76, left hemisphere 26.8
2686 Male, age 75, right hemisphere 24.3
Hippocampus, CA1
nTPM: 37.9
2749 Male, age 80, left hemisphere 57.2
2527 Male, age 74, both hemispheres 39.8
1873 Female, age 85, both hemispheres 38.0
2082 Female, age 91, right hemisphere 32.2
2045 Male, age 76, both hemispheres 22.3
Hippocampus, CA2
nTPM: 38.6
1892 Male, age 76, both hemispheres 50.7
1963 Male, age 80, left hemisphere 45.8
2249 Male, age 74, both hemispheres 43.8
2437 Female, age 94, left hemisphere 32.7
2113 Female, age 91, right hemisphere 32.3
1940 Female, age 85, left hemisphere 26.6
Hippocampus, CA3
nTPM: 33.2
2436 Male, age 74, both hemispheres 46.8
1867 Male, age 76, both hemispheres 35.5
2137 Male, age 80, left hemisphere 35.2
1891 Female, age 85, both hemispheres 29.7
2620 Female, age 94, left hemisphere 28.1
2861 Female, age 67, both hemispheres 24.1
Parahippocampal cortex
nTPM: 29.9
1850 Male, age 80, both hemispheres 39.1
1990 Female, age 91, right hemisphere 38.3
2250 Female, age 67, right hemisphere 34.5
2245 Female, age 91, both hemispheres 30.5
1933 Female, age 85, both hemispheres 29.6
2692 Male, age 74, both hemispheres 28.9
2693 Female, age 94, both hemispheres 28.3
2532 Female, age 72, left hemisphere 25.8
2018 Male, age 76, both hemispheres 23.8
2622 Female, age 67, right hemisphere 20.7
Perirhinal gyrus
nTPM: 33.5
1847 Female, age 91, left hemisphere 45.2
1794 Male, age 80, right hemisphere 40.9
2521 Female, age 94, right hemisphere 30.4
1841 Female, age 85, right hemisphere 29.9
2848 Male, age 76, right hemisphere 21.1
Subiculum
nTPM: 30.5
1901 Male, age 80, both hemispheres 35.1
1977 Female, age 85, both hemispheres 32.3
2438 Female, age 94, left hemisphere 31.7
2619 Male, age 74, both hemispheres 29.3
2729 Female, age 91, right hemisphere 28.8
2042 Male, age 76, both hemispheres 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 72.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.2
Samples: 197

Max nTPM: 133.2
Min nTPM: 44.6
Std nTPM: 14.5
Median nTPM: 70.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 133.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 125.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 121.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 112.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 103.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 100.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 99.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 99.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 95.9
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 95.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 94.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 60.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.1
FF:10153-102I9 76 years, female 64.1
FF:10169-103B7 60 years, female 56.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 122.2
Pig sample Sample description nTPM
Subiculum
nTPM: 108.1
Samples: 4

Max nTPM: 139.1
Min nTPM: 93.5
Sample A Female 139.1
Sample B Female 98.2
Sample C Male 101.6
Sample D Male 93.5
Dorsal hippocampus
nTPM: 122.2
Samples: 4

Max nTPM: 162.9
Min nTPM: 91.0
Sample A Female 162.9
Sample B Female 115.6
Sample C Male 119.2
Sample D Male 91.0
Entorhinal cortex
nTPM: 116.8
Samples: 4

Max nTPM: 131.8
Min nTPM: 96.8
Sample A Female 117.7
Sample B Female 131.8
Sample C Male 121.0
Sample D Male 96.8
Ventral hippocampus
nTPM: 119.0
Samples: 4

Max nTPM: 146.0
Min nTPM: 82.7
Sample A Female 128.6
Sample B Female 82.7
Sample C Male 146.0
Sample D Male 118.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 285.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 285.0
Samples: 4

Max nTPM: 313.4
Min nTPM: 271.5
Sample A Male 273.9
Sample B Male 271.5
Sample C Female 281.1
Sample D Female 313.4
Hippocampal formation
nTPM: 279.5
Samples: 4

Max nTPM: 303.5
Min nTPM: 263.5
Sample A Male 267.6
Sample B Male 283.4
Sample C Female 303.5
Sample D Female 263.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 24.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 24.9
67815548 Antisense, RP_040920_01_H08, Mouse strain C57BL/6J (56 days, male) 24.9

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