COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endocrine cells: Not detected
Endothelial cells: Not detected
Enterocytes: Not detected
Enterocytes - Microvilli: Not detected
Fibroblasts: Not detected
Goblet cells: Not detected
Mucosal lymphoid cells: High
Peripheral nerve/ganglion: Not detected
RNA expressioni
Consensus:8.0 nTPM
HPA:8.0 nTPM
GTEx:7.3 nTPM
FANTOM5:17.1 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells020406080100120140nCPM

COLON - Antibody stainingi
Antibody HPA015083Antibody CAB020840
Endocrine cells Not detected-
Endothelial cells Not detectedLow
Enterocytes Not detected-
Enterocytes - Microvilli Not detected-
Fibroblasts Not detected-
Glandular cells -Medium
Goblet cells Not detected-
Mucosal lymphoid cells High-
Peripheral nerve/ganglion Not detectedMedium




COLON - HPA RNA-seqi
Average nTPMi 8.0
overview
Male, age 54
Colon sample 67
nTPM: 7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 7.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 16.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 6.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 11.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 5.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 5.4
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 7.8
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 8.3
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 6.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 8.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 6.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 6.7
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 7.3
GTEx sample id Sample description nTPM
4.35.16.02.48.502468101214
Colon - Sigmoid
Average nTPM: 5.4
Samples: 419

Max nTPM: 15.5
Min nTPM: 2.4
Std nTPM: 1.6
Median nTPM: 5.1
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 15.5
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 15.1
GTEX-1RNTQ-1626-SM-GQ1EI 20-29 years, female 13.9
GTEX-1PWST-2526-SM-E76QW 70-79 years, male 11.6
GTEX-15F5U-1426-SM-7KUN2 40-49 years, male 11.3
GTEX-17EUY-1726-SM-79OK4 20-29 years, male 10.6
GTEX-VJYA-2126-SM-4KL1O 60-69 years, male 10.1
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 9.8
GTEX-XMK1-1626-SM-HLJRZ 40-49 years, male 9.8
GTEX-WEY5-1626-SM-HLJRJ 40-49 years, female 9.7
GTEX-Y8E4-2326-SM-EAZAZ 40-49 years, male 9.7
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5.57.08.62.312.80246810121416182022
Colon - Transverse
Average nTPM: 7.3
Samples: 479

Max nTPM: 22.7
Min nTPM: 2.3
Std nTPM: 2.5
Median nTPM: 7.0
GTEX-P44H-2126-SM-HAUY3 40-49 years, male 22.7
GTEX-1S5ZA-1526-SM-HLJR3 20-29 years, male 18.0
GTEX-14JIY-3326-SM-6871E 60-69 years, male 17.7
GTEX-1IDJD-2226-SM-A96TD 30-39 years, male 17.1
GTEX-17EUY-1826-SM-7DUEZ 20-29 years, male 16.1
GTEX-1JMPY-0426-SM-C1YQ3 30-39 years, male 16.1
GTEX-OHPL-1426-SM-G9ER7 60-69 years, female 16.1
GTEX-Q2AG-2026-SM-HAUY4 40-49 years, female 15.9
GTEX-QESD-1126-SM-H7OFF 20-29 years, male 15.5
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 14.6
GTEX-1PIGE-1426-SM-E9U61 20-29 years, male 14.0
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 17.1
FF:10014-101C5 62,83,84 years, mixed 17.1

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